Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0657400
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Entry
Os11g0657400 CDS
T02163
Name
(GenBank) Atrophin family protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRRNT_2
Motif
Other DBs
NCBI-ProteinID:
BAF28760
RAP-DB:
Os11g0657400
UniProt:
Q0IRA5
LinkDB
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Position
11
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AA seq
1064 aa
AA seq
DB search
MDLRLLLAPGGRRAAMALILAVLAACLSSAANVGAVTSAEVSYIAHRQLLAMKEAGVSEE
GDLPSDDFDFDDRVGVAVGDFPNPRLRKAYIALQAWRRAFYSDPKGYTNNWTGNDVCSYN
GVICYAAIDDPKIMVVAGIDLNGADIAGYLPPELGLLTDLAFFHINTNRFCGIIPKSMSR
LSLLHEFDVSHNRFVGVFPHVCLEMAVLKYLDIRFNDFEGELPPALFDKELDAIFVNSNR
FVGYIPGNLGNSTASVIVFANNAFVGCIPKSIGCMAKTLDEISFMNNKLDGCVPMEMGYL
QNTYVIDISGNVLVGTLPTSLSNCSKLEQLDVSRNVFTGIVHESICELPVLVNFSFAYNF
FNSESAPCMPSESSKVNLDDKDNCLGALRPAQKTTLQCAPVLARPVDCSKHVCPGHPTPG
KPSEPPEKPPLIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEEPPEEPTPSPT
PSSPESPAKMAPPPAPAIKGVTSPPAEYGAPPPPSSGWLPKSPERKKAPPPQAEPPTEYS
PPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTP
EEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASS
PPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTP
ESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKS
PPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSS
PPPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPEGKSPPS
HTPESSSPPSKESEPPPTPTPKSSPPSHEEYVPPSPAKSTPPPEEKSPPSHTPESSSPPS
EESEPPPSPTPKSSPPSHEEYVPPSPAKSTPPPEKPLPPHTPTINSSPPSEEEYMPPSPV
KSSPPPAEKSQPPPSPVETTTNKVFTAASASDLGTTASKVFTST
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggacctccggctcctcctcgcccccggcgggcgccgcgccgccatggcactgattctc
gccgtcctcgccgcctgcctctcctccgccgccaacgtcggcgcggtgaccagcgccgag
gtgtcgtacatcgcgcaccggcagctgctggcgatgaaggaggccggcgtgagcgaggag
ggcgacctgccgtccgatgacttcgacttcgacgaccgcgtcggagtcgccgtcggcgac
ttcccgaacccgcggctccgcaaggcgtacatcgcgctccaggcgtggcggcgcgcgttc
tactcggaccccaaggggtacaccaacaactggacgggcaacgacgtgtgctcctacaac
ggcgtcatctgctacgccgccatcgacgaccccaagatcatggtggtcgccggcatcgac
ctcaacggcgccgacatcgccgggtacctcccgccggagctcggcctcctcaccgacctc
gccttcttccacatcaacaccaaccgcttctgcggcatcatccccaagagcatgtcgagg
ctgtcgctgctgcacgagttcgacgtcagccacaaccgcttcgtcggcgtcttcccccac
gtctgcctcgagatggccgtgctcaagtacctcgacatccgcttcaacgacttcgagggc
gagctgccgccggcgctgttcgacaaggagctcgacgccatcttcgtcaacagcaaccga
ttcgtcggctacatcccgggcaacctcggcaactccaccgcctccgtcatcgtcttcgcc
aacaacgccttcgtcggctgcatccccaagagcatcggctgcatggccaaaacgctcgac
gagatcagcttcatgaacaacaagctcgacggctgcgtgcccatggagatgggctacctg
cagaacacctacgtcatcgacatcagcggcaacgtcctcgtcggcacgctgcccacctcg
ctctccaactgcagcaagctggagcagctggacgtgtccaggaacgtcttcaccggcatc
gtccacgagtccatctgcgagctccccgtgctcgtcaacttcagcttcgcctacaacttc
ttcaactccgagtcggcgccgtgcatgccgtcggagagcagcaaggtcaacctcgacgac
aaggacaactgcctcggcgcgctccgaccggcgcagaagacgacgctgcagtgcgccccc
gtgctcgcccgccccgtcgactgcagcaagcacgtctgccccggacacccgacgcccggg
aagccgtcggagccgccggagaagccgccgctcatcccggtgccggtggggccgccggag
aaatcgccggcttacgaggaaccaccggccgcgccttccaccccgacgtcgcacggcccg
ccacctccagaggaggagtcacctgaggaaccacccgaggaaccaacaccgtcgccgaca
ccaagcagcccagagtcaccggccaagatggcgccgcctccggcacccgccatcaaggga
gtgacatcgccgccggcagagtatggtgctccaccgccaccaagttcgggttggctcccc
aagagtcccgagcgcaagaaggcacctccgccacaagcggagcctcctactgagtactcc
ccacctgcaactccagagagctcgccaccacctgaagggaagtcccctcctacgccgacg
gcctcgcactcgccaccaccggtaccagagggccacacaccttccccaccaaagtcggga
ccacctgctggggagtctcctcctacacctgagtcaaaagcctcgcctccaccgactcca
gaagaatacacaccttccccgccaaaatcgacaccaccagctgagaagtctcctcctaca
cctgagtcgaaagcctcatctccaccaccacccgctccagagggccacacaccttccccg
ccagagtcgacaccaccatctgagaaatctcctcctacacccgagtcgaaagcctcatct
ccaccaccacccactccagagggccacacaccttccccgccaaagtcgacaccgccaact
gagaagtctcctcctacacctgagtcggaatcctcctctccaccaccacccgctccagag
ggccacatgccttccccgccaaagtcgacgccaccagttgagaagtctcctcccacgcct
gagtcggaagcctcatctccaccaccacccgctccggagggccacacaccttccccacca
aagtcatcaccaccagaagagaagtctcctcctataccgccgacctcgcatacatcacct
ccaactccagaggaatacacaccttccccaccaaagtcatcgccaccagaagagaagtct
cctccaccacattccccagaaaagtcaccaccatcagaggctcacccaacttctccacct
ccctcggagaagtcacctccaacaccagctgaagagagttctccgccaactccggaaaaa
tctccatcaccaccatcgggtcatgaaggcactccaccatccccagtgaaatcttcctca
ccaccaccagaagctcatgttagctcaccaccaccagaaaaatcttcctcgccaccacca
gaagctcatgttagttcaccaccaccacctgaaaagtctccaccaccaccagagacaaag
tctccaccaacgctaacaccggagatctctccacctccggaagggaagtccccaccatca
catactccggagagctcatccccaccatctaaggagtcagaaccaccaccgacaccaaca
ccaaagagctctccaccatctcacgaggagtacgttcctccatctccggcaaaatcaact
ccacctccagaagagaagtccccaccatcacatactccggagagctcatccccaccatct
gaggagtcagaaccaccaccgtcaccaacaccaaagagctctccaccatctcacgaggag
tacgttcctccatctccggcgaaatcaactccacctccagaaaagccactaccaccacac
acaccaacaataaatagttctccaccatcggaagaagagtacatgcctccatctccagtg
aaatcaagtccaccaccagccgagaagtcccagccaccgccatctccagttgaaaccacc
accaacaaagtcttcaccgccgcaagtgccagtgacctcggaaccaccgccagcaaagtc
ttcacctccacatga
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