Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0689400
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Entry
Os11g0689400 CDS
T02163
Name
(GenBank) WW/Rsp5/WWP domain containing protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os11g0689400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os11g0689400
03009 Ribosome biogenesis [BR:
dosa03009
]
Os11g0689400
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Os11g0689400
Spliceosome [BR:
dosa03041
]
Complex A
U1 snRNP components
U1 related factors
Os11g0689400
Complex B
Os11g0689400
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-60S particles
Helicases
Os11g0689400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAF28853
RAP-DB:
Os11g0689400
UniProt:
Q2QZE8
A0A5S6R6Q9
LinkDB
All DBs
Position
11
Genome browser
AA seq
1398 aa
AA seq
DB search
MAATEAATDSSGPRYAPDDPTLPAPWKGLIDGSTLYYWNPDTNETQYERPVAAVPPLPTG
PPPVTTTPMPTSASGAFSQPSMQSNQGGQVSQSQQERPGQTVYPQASHLGHQQLQQPTQQ
SPFQPTAQHQAPFQHSQRAPYQQQQQQMSQQPPAHQYPSTHPQHMPYQHGHYMQPQQQQF
QQGPQYSYQVGQQQQMPQAAYNQGQQQPISQAAYNQSQQPAQAVGAYNQGQQPPVSQASY
NQSQQPTQAAGAYNQGQQPSMPQASYNQVQPPQMAHATYNQGQQPPGMRIPQGQVQPQQS
PGFHQPAQVSQVLQGSQSQGLQMPPQQGQLQHGFHLTTPQGKQPHHGHVGPQLSQVPLGQ
QSSTLKVDETGVTGGLDGKQTGFSLPLSQQRGQGPVSKQQLPSNHQLSGSHNQPNIPGAG
GPSYPAKHHLGGSSPGEANNMNFLSSPAQMHQGGMDTNYRQHPASSPVVPNHIGPSPVRP
PMGFKMGSSEDHFERNELYSSGRMDGTNNLQQQPKLAALPPLNRPQDMRNGPPYPQPDNL
GAFNMGPPHSVPNLHNHGPFPEASMRPPSRMFAPPNFPSIASADAYRQHHEVTAVGENVP
PPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLI
PAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQL
RELERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPR
NRQTLMYTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLE
QILRAQERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDNVLNQFRTGRAP
ILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYA
GDLVKVLEGANQHVPPELQEMAARGAAGAPRNQAGGMSRWDGPGGGGNRFESAVGIPGSY
GGIRDGPGGFGGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGREGPVGFGGQES
PGGFGGRKGPGAFEGREGAAPGSFGGRGGRGPGGFGGRGGGSPGGFGGRGGRGDSHGFGG
RGRGDFSGFGGRGRGDSSGFGGRGRGDFSGGRGGRGRGFGGRGRSDRGPHDRFISDGRGR
YDNRRGFGGKGRDRSYSRSPDRGRSRGYDRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSR
SRSRSRSPSRSRSRSYDQGAGPARRPRPRSGFDVLPPATGAGPASTGPGPVAVPAPGSAG
PVPPQVPAQSLADASAMSPMSPGGLAQEGAPFNGGNDGGLVPAQGVLPFQGSDVAMPPNF
AAAEAFPGPAVEQEAPDV
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacagaggccgccacagattcatcgggtccgcgatatgctcctgatgaccca
acgctccctgcaccctggaaaggactaatcgatggatcaaccttgtactactggaaccct
gatactaatgagactcaatatgagaggccggtggccgctgtgcctcccttgccaacaggt
cctcctccagtaaccactacacctatgccaacatccgcatcaggggctttttcacagcct
agcatgcagtcgaaccaaggtggtcaagtatcacagtcccagcaggaacgacctggtcag
acagtataccctcaagccagccatcttgggcatcagcaactccaacagccaacccagcaa
tcaccgtttcagccaacggctcagcatcaagctccgtttcagcattcacaacgagcgccc
tatcaacaacagcagcagcagatgtcgcagcaacctcctgcccatcagtaccccagcaca
catccacaacatatgccataccagcatggccattatatgcaaccccagcagcagcagttt
cagcagggcccacaatattcatatcaggttggccagcagcaacagatgccgcaagctgcc
tacaatcaaggtcagcagcagcctatttctcaagctgcctacaaccaaagtcagcagcca
gcgcaagccgtgggtgcctacaatcaaggtcagcagccgcctgtttctcaagcctcatac
aaccaaagtcagcagccaacacaagctgcaggtgcctacaatcaaggccagcagccgtca
atgccccaagcttcctataatcaagttcagccgccacaaatggcacatgctacttacaat
caaggtcagcagccacctggaatgaggatccctcagggtcaggtgcaacctcagcaatca
ccgggctttcatcaacccgctcaggtttcacaagtgctgcaaggttcacagtctcaagga
cttcaaatgccgccacagcaaggccaactccagcatggcttccatttgacaactcctcag
ggaaaacaaccacatcatggccatgtaggtcctcaattgagccaagtgccacttgggcag
cagagttccactctgaaggttgacgagacaggagttacaggaggtcttgatggaaaacag
actggtttttcattaccactcagtcagcagcgtggccagggtcctgtttcaaaacaacag
ttaccttctaatcatcaactttctggatcacataatcagccaaatattcctggagctgga
gggccatcatatcctgcaaagcatcatcttggtggatcatccccaggcgaggctaacaac
atgaattttttgagctcacctgctcaaatgcatcaaggtggtatggatacaaactatcga
caacatccagctagcagtcctgtcgttccaaatcatattggtccttcaccagttcggcct
ccaatgggtttcaagatgggcagtagtgaggatcactttgaaagaaatgagctttactct
tctggcaggatggatggaacaaataatctccagcagcagccaaagcttgctgcactacca
ccactaaaccggccgcaggatatgaggaacgggccgccttatcctcagccagataattta
ggggcttttaacatgggacctccacattcagtgccaaatttgcataaccatggtccgttt
cctgaagcttcaatgaggcctccgtccagaatgtttgctcccccaaattttccgagcatt
gcttcagctgacgcatatcgtcaacaccatgaagtcactgcagtgggtgagaatgtgcct
cctccatttatgacattcgaggctactggattccctccagagatcttgcaagagatccat
gcagctggcttcttaaaccccactccaattcaagctcaaacatggcctgttgcactgcaa
aatcgggacatagtagctattgccaagacaggatcagggaagacgctggggtaccttatt
cctgcttttatacatcttaggcgataccaaaacaacccaatgttgggccctacagtgtta
gttttggcccctacccgagagcttgcttcacaaatacaagacgaagcagtcaagtttggt
cgatcatctagagtctcctgcacttgtctgtatggggggacttcaaagggccttcagcta
agagaacttgagcgtggagcagatattgtcgttgcaactcctggacgtcttaatgatatc
ctggagatgaggaagattagtctccatcaagtttcatttcttgtgcttgatgaggctgac
cgtatgcttgatatgggttttgagccacaaatacgtaagattgtggatgagattcctcga
aacagacagactctgatgtatacggccacttggccaaaggaagttacaaaaattgctggg
gatttactgaaagatcctgttcaggttaatattggtagcattgatgaactcgttgccaac
aaatccatcacacagtatgtagaggtggttccaccattggacaagcagcggcgattggag
cagatacttagagctcaagaaaggggctctaaggtcatcatattctgctcaaccaagaaa
atgtgtgaccagcttgctcgtgacattggtcgtagttttggtgctgcaagtattcatggt
gataaatcacaggctgaaagggataatgttctgaatcagtttcgcactggcagagctcca
atattagtagccacagatgttgctgctcgtgggcttgacatcaaagatatcagagtagtg
atcaattatgactttcccactgggatcgaggactatgttcaccgtatagggcgtacagga
agggctggggcaactggagtctcatatactttcttttctgaacaagattggaaatatgct
ggtgatttggtgaaagtcttggaaggtgctaatcagcatgtccctccagagttgcaagag
atggctgcaagaggtgcagctggagctccaagaaatcaagctggtgggatgagccgttgg
gatggacctggtggtggtggtaaccgttttgaatctgctgttggtattcctggtagttat
ggtggaattagggatggcccaggcggctttggtggccgtgatggcccaggcggttttggt
ggacgggatggcccaggcggctttggtggtcgggatggccctgggggttttattggtcga
gaaggtcctggtggctttggcggtcgggagggtcctgttggctttggtggtcaggagagt
cctggtggctttggtggacgcaagggacctggtgcctttgaaggtcgagagggtgctgct
cctggtagctttggtgggagaggtggtcgtggacctggtggttttggtggcagaggtgga
ggaagtcctggtggttttggtggccgtggtggcaggggtgattctcatggttttggtgga
cgtgggaggggtgacttttctggctttggtggacgtggcaggggtgattcttctggcttt
ggtggacgaggccgtggtgatttctctggtggacgtggtgggagagggcgtggatttgga
gggcgtggacgatctgaccgaggcccacatgaccgttttatctcagatggacgtggaaga
tacgataaccgccgaggatttggtggcaagggtcgggaccggagctacagccgcagccca
gatagaggccgctcgcgaggctatgaccgaagaagtggcagtaggagcctaagtagtagg
agcagaagccgaagcaggagctggtcacgtagtaggagccgcagcaggagctggagccgg
agccgtagccgcagccgcagcccaagtcgcagcaggagcagaagctatgaccagggtgca
ggaccggcacgcaggccccggcctagatccggcttcgatgtcctgccacctgcaaccgga
gccggtcctgcttcaaccggtcctgggcctgtagctgtacctgcacctggatcagcaggt
cctgttcccccgcaggtacctgcacaatcactggctgatgcatctgcaatgtcaccaatg
tcaccaggtggcctagcacaagaaggtgcaccgttcaacggcgggaacgatggcggcctc
gtcccagcacaaggggtactccctttccagggttctgatgtagcaatgccaccaaatttt
gctgcagctgaagcgtttccaggcccggcagttgagcaggaagcccctgatgtataa
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