Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0708500
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Entry
Os11g0708500 CDS
T02163
Name
(GenBank) Vitamin B6 biosynthesis protein family protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00750
Vitamin B6 metabolism
dosa01100
Metabolic pathways
dosa01240
Biosynthesis of cofactors
Module
dosa_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Os11g0708500
Enzymes [BR:
dosa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Os11g0708500
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-ProteinID:
BAF28926
RAP-DB:
Os11g0708500
UniProt:
A0A0P0Y5R5
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Position
11
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AA seq
363 aa
AA seq
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MASSDDGVVALYGGGKVSCKPPAATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA
VMALERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYV
DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAV
RHVRSVMGEIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADA
ALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEILADVSAGLGDAMSASTST
TKMSSATPPAPTEQLLLLLLLPLSSSLSAPHRWMVNVNQQSSSLTNFLLTMDWRMDDCCC
HYY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctgacgacggcgtcgtggccctctacggcggcggcaaggtctcctgcaag
ccccccgccgccaccttctccgtcaaggtgggccttgcccagatgctgcgcggcggcgtc
atcatggatgtggtcacccccgagcaggcacgcctcgccgaggaggccggcgcctgcgcg
gtcatggcgctggagcgcgtccccgccgacatccgcgcccagggcggcgtcgcgcgcatg
tccgacccggcgctcatccgcgacatcaagcgcgccgtcaccatcccggtcatggccaag
gcccgcataggccacttcgtggaggcccagatcctggaggccatcggcgtggactacgtg
gacgagagcgaggtgctcacccccgccgacgacgcccaccacatcaacaagcacaacttc
cgcgtccccttcgtctgcggctgccgcgacctcggcgaggccctccgccgcatccgcgag
ggcgccgccatgatccgcaccaagggcgaggccggcacgggcaacgtcgtcgaggccgtc
cgccacgtgcgctccgtgatgggcgaaatccgcgcgctccgcaacatggacgacgacgag
gtcttctcctacgccaagcgcatcgccgcgccctacgacctggtcatgcagaccaagcag
ctgggccgcctccccgtcgtgcagttcgcggccggcggcgtcgccacccccgccgacgcc
gccctcatgatgcagctcggctgcgacggcgtcttcgtcggctcgggcatcttcaagagc
ggcgaccccgcgcgccgcgcccgcgccatcgtgcaggccgtcacccactacagcgatccg
gagatcctcgccgacgtcagcgctggcctcggggacgccatgtcggcatcaacctcaacg
accaaaatgtcgagcgctacgccgcccgctcccactgagcagctcctgctcctgctcctg
ctccctctctcctcttctctctcagctccgcaccggtggatggtgaatgtgaatcaacaa
tcgtcttctctcactaattttctcctcacaatggactggagaatggatgattgttgctgc
cattattattag
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