Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0708600
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Entry
Os11g0708600 CDS
T02163
Name
(GenBank) Similar to RECQL1 protein
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os11g0708600
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Os11g0708600
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
Os11g0708600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
CitX
Motif
Other DBs
NCBI-ProteinID:
BAF28927
RAP-DB:
Os11g0708600
UniProt:
Q0IQT8
LinkDB
All DBs
Position
11
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AA seq
685 aa
AA seq
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CIWDFFIPAESKRGKIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLHDGITLVVSPLLSL
IQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSK
LEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQI
DLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCF
SRKECEQVAKELSERGILADYYHADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPD
VRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYD
IVRYCQSKRSCRRGAFFRHFGEAAQDCNGMCDNCTSSLELKEIDATRMMILHQLGNFTVA
LNYILDTCMFFSLYFYKMVFLGDIFLGKISFMYIYTSIVSMTYCTDHTKIIVSLLHDIQL
NDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVVQLILDRVLKEEFQHTAYATN
AYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLEAKLDDLRRELSSSN
GGVFPHAVLSAQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIELMLLHIDSEVAGGK
ACASKRQKKDKEDVICVESSEEEDV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
tgtatttgggatttcttcataccggcagaatcaaagagaggtaagataatcaatgccatc
atgagtggaagagatgtactggtcataatggctgctggtggagggaagagcctctgctat
caactacctgctgtacttcatgatggaattacattggttgttagtcctttgctttccctt
atccaggaccaggtcatgggactagcagctttaggtatacaagcatacatgctggcttca
actaccaataaggaagtcgagaagttcgtctacaaggcgcttgataaaggtgaaggagaa
ctgaagatattgtatgtgacacctgaaaagatatccaaaagtaaaaggttcatgtctaag
cttgagaaatgccaccatgcagggcgtctttctctcattgcaatagatgaggcacactgc
tgtagtcaatggggccatgattttcgcccagactacaagaatcttggcattttaaaggtc
cagtttcccagtgttcctatgatagctttaactgcaactgcgacaaataaagtgcaaatt
gatttgatagagatgcttcatatccctagatgtgtcaagtttgtcagcacaattaacagg
cccaaccttttctataaagtatttgagaaatcaccagttggaaaggtcgtcattgatgag
attgcaaactttataagtgaatcgtacccgaataatgaatctgggattgtttactgcttt
tctaggaaggaatgtgaacaggtcgcaaaagaactgtctgaaaggggtattttagcagat
tattatcatgcagatatggatgttatttctcgtgagaaagttcatatgcgctggagcaaa
agcaaattgcaggtcattgttggaacagtggcgtttggaatgggaatcaacaagccagat
gtcaggtttgtgattcaccacagccttagtaaatctatggaaacatactaccaggaaagt
ggaagggcagggagagatggactaccttcagaatgtattctgtattatcgacctggtgat
gttccacgccaaagttcaatggtcttctatgaaaactgtggcctgcaaaatctttatgac
atagtacgatattgtcagtctaagaggagctgtcgtcgtggtgctttcttccggcatttt
ggagaggctgcacaagattgcaatggaatgtgtgacaactgcacttctagtcttgagctc
aaggagatagacgctacccgtatgatgattttacatcagcttggaaattttactgttgca
ctgaattacatacttgatacttgcatgttctttagtttatatttttacaaaatggtattt
ttgggagacatatttcttggaaagatttcgtttatgtatatttacacttcgattgtttct
atgacttattgtacagaccatactaaaattattgtttcgcttctacatgatatccaactt
aatgaccaaagagctacattgttgcagctggttgataagttcaaggcaaagtggaaagat
ttaggttgttcaaatgagtccattgatcttaagaaagaaggcattgaacagttggtagtt
caacttatactcgatcgggttttgaaagaagaatttcagcatacagcatatgcaaccaat
gcatatgttgccttgggaccactgtggaagccagcactacaagggaacagaccggtcaag
cttagcgttgcttttcactctcaggataaaggtagtggatccaaacggactaagcgcaac
cagatgagtaatttggaagctaagcttgatgacctgcggagagagctctcttccagtaat
ggaggcgtattcccacatgctgttctttctgcccagcaaatttccctcctgaaccgccaa
aaaccaaccactgttgctgagcttgaaaagcttataggaaaggttaagacaggtaagtac
gggagcgcgatcattgagctcatgctgttacatattgattcagaagtagccggaggaaag
gcctgtgcatcgaagaggcaaaagaaagataaggaggatgttatttgtgttgagagtagc
gaggaggaggatgtttaa
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