Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0110000
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Entry
Os12g0110000 CDS
T02163
Name
(GenBank) Regulatory associated protein of TOR family protein
KO
K07204
regulatory associated protein of mTOR
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
Os12g0110000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os12g0110000
Membrane trafficking [BR:
dosa04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
Os12g0110000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
HEAT
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
HEAT_2
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
DUF4042
Motif
Other DBs
NCBI-ProteinID:
BAF28980
RAP-DB:
Os12g0110000
UniProt:
Q0IQN5
LinkDB
All DBs
Position
12
Genome browser
AA seq
1242 aa
AA seq
DB search
ISVDPPDVIKISPCARKECWIDPFSMAPPKALETIGKTLHSQYERWQPKARYKLQLDPTL
EEVKKLCNTCRKFARTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPITDLDSWLK
TPSIYVFDCSAAGMIVKAFLERLDWSSSSSASSSKDCILLAACEAHQTLPQSAEFPADVF
TACLTTPIKMALHWFCNRSLLRDSMEHNLIDQIPGRQNDRKTLLGELNWIFTAITDTIAW
NVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPLLPPTHQHHMWDAWDMA
AEICLSKLPQLIADPNAEFQPSPFFTEQLTAFEVWLDHGSEDKKPPEQLPIVLQVLLSQS
HRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKS
CQVDLVKDGGHAYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRIGQEACANAGLIDVCLR
HLQPENPNDAQTEPLLLQWLCLCLGKLWEDFPEAQLLGLQSNAPEIVICLLSEPQPEVRA
SAVFALGNLVDIGSPSLNGADDDSDDDEKVRAEINVVRSLLQISSDGSPLVRSEVAVALT
RFAMGHNKHIKSVAAEYWKPQTNSLLKSLPSLANINSSNVYSPSSLIQGSSGLASHIGPV
LRVGSDNSATARDGRISTSSPIATNSIMHGSPQSDDSSQHSDSGILLRENASNGGLNYSR
SRPIDNGIYSQFIATMCNVAKDPYPRIASIGKRALSLIGVEQVSMRNSRLSNGGAHPGET
SVPPSSNFGMARSSSWFDMNSGNFSVAFRTPPVSPPQHDYLTGLRRVCSMEFRPHVLNSP
DGLADPLLSSSAAPSNMGLYILPQSLIYRWSCGHFSRPLLTGSDDNEEANARREERERIA
MDCIAKCQRSSCKMTSQIASWDTRFELGTKASLLLPFSPIVVAADENEQIRVWNYDDALP
VNTFENHKLSDRGLSKLLLINELDDSLLLVGSSDGNVRIWRNYTQKGGQKLVTAFSSVQG
YRSAGRSIVFDWQQQSGYLYASGDMSSILVWDLDKEQVNTIQSTADSGISALSASQVRCG
QFAAGFLDASVRIFDVRTPDRLVYTARPHAPRSEKVVGIGFQPGFDPYKIVSASQAGDIQ
FLDVRRASEPYLTIEAHRGSLTALAVHRHAPVIASGSAKQMIKVFSLEGEQLTIIRYQPS
FMGQRIGSVNCLSFHRYKSLLAAGAGDNALVSIYAEDNYQVR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
attagtgttgatccgccggatgtgatcaaaatctccccttgtgcaagaaaggagtgctgg
atagatccattttctatggcacctccaaaagcccttgaaactattgggaaaacattacac
tcacaatatgagcgctggcagccaaaggctcgttacaagcttcagctggatccgacatta
gaggaagttaagaagctatgtaatacttgccgtaaatttgctagaacagagagagtcctt
tttcattacaatggtcatggtgtaccaaagcctacagctaatggggagatttgggtattt
aacaagagttacacacagtatattccgcttcctattactgatcttgattcatggctgaaa
acaccctctatatatgtttttgactgctcagcagctggaatgatcgtgaaagcttttctg
gagcgcctagactggagttctagctcgtctgcatcttcatcgaaggactgcattctcctt
gcggcctgtgaggcacatcaaactctcccacagagcgcagaatttcctgctgatgtgttc
acagcttgcctcaccacacccatcaaaatggcactgcactggttttgtaaccgatcgtta
ctccgtgattccatggaacacaatcttatcgaccaaattcctggaaggcaaaatgaccgc
aaaactcttctaggggagttgaactggattttcactgctatcacagacactattgcatgg
aatgttcttcctcatgatctattccaaagacttttcaggcaggatcttttggttgctagt
ctctttcgcaacttcttacttgctgagagaatcatgcggtccgcaaattgttccccaatt
tcataccctttgttgccaccaactcatcagcaccatatgtgggatgcatgggacatggct
gcagagatctgcctttctaagcttcctcaattaattgctgatcctaatgcagagtttcag
ccgagtccatttttcacggagcaattgacagcatttgaagtttggcttgatcatggctct
gaagacaagaaacccccagaacagctacctattgttcttcaggttttgcttagtcagtca
cacagatttagagcacttgttctgcttggaagatttcttgacatgggaccttgggcagtt
gatttggctttgtccgttggcatcttcccttatgtacttaaactgcttcaaacaagtgca
atggagttgcgccaaattcttgtgttcatatggacaaaaattctctctcttgataagtca
tgccaggttgacttggtgaaagatggagggcatgcatactttatcaggtttcttgacagt
ttggatgcttacccagagcagcgtgcaatggctgctttcgttttagccgttattgtggat
gggcataggattggtcaagaggcttgtgctaatgcagggcttatagatgtctgcctgaga
catctgcaacctgaaaatccgaatgatgctcagacagagcctttgctcttgcaatggctt
tgtttatgccttggcaaactttgggaagatttccctgaggctcagttacttggtctgcaa
tcaaacgcaccggaaattgttatatgcttattgtcagagcctcaacctgaagtcagagct
tctgctgtttttgcacttggaaatcttgtggatattggatctccatcactgaatggagct
gacgacgattctgatgatgatgaaaaggtgagagctgaaataaatgttgtccgaagcctt
ctgcagatctcttcagatggtagccctcttgttagatctgaggttgccgtagcgcttacc
cgctttgcaatggggcacaataaacatatcaaatctgttgccgccgagtactggaaacct
caaaccaattcactgctcaagtcattaccatcgttggctaatattaattcgagcaatgtt
tacagtcccagcagcttaatacaaggtagcagtggccttgcctcacatattggtcctgtt
ttaagggttggcagtgataacagtgccactgctcgtgatggaagaatctctacgagcagc
ccgattgcaacaaatagcatcatgcatggttctccacagtcagatgattcttcccaacac
tctgattcaggcatattactgagagagaatgcaagtaatggtggtctcaactactcaaga
tcgaggcctattgataatgggatctattcccaatttatagcaactatgtgcaatgttgct
aaagatccttacccaagaattgcaagtattgggaaaagggcattgtccctcataggtgtt
gagcaagtaagcatgagaaacagtagacttagcaatggaggtgcacacccaggagagaca
tctgtgcccccttcatcaaactttggaatggcacgctcctcttcctggtttgatatgaac
tctggaaatttctcggtggcctttaggactcctcctgttagtccccctcagcatgactac
ctcacaggattgcgccgagtgtgctcgatggagttcagaccacatgttttgaactcacct
gatggcttagctgatccgcttttaagctccagtgcagcccccagcaacatggggctctat
atacttccccaatcattaatttacagatggagttgtggtcacttttctaggccacttcta
actggttctgatgataacgaggaagcaaatgctagaagagaagagcgagaacgaattgca
atggattgcattgctaaatgccaacgatcatcttgcaagatgaccagccaaattgctagc
tgggatacgaggtttgagttgggtacaaaagcatcattgttgttgccattttctcctatt
gttgttgctgcggatgaaaatgagcaaatacgagtatggaactatgacgatgcgctgcca
gtgaatacttttgaaaaccacaagttatctgacagaggcctatctaaacttttgctgatc
aatgagcttgatgatagcttgttgttagttggctcaagtgatggaaatgtccgcatatgg
agaaactatactcaaaagggaggacaaaaacttgtaactgctttttcatcagttcaaggc
tatcgaagtgctggtcgcagtattgtatttgattggcagcaacagtcgggttatctgtat
gcatctggtgacatgtcctctatccttgtatgggatcttgacaaggaacaagtcaacacc
atccagtcaactgctgatagcgggatttcagctctttctgcatctcaggttcgatgtggc
caattcgctgctggttttcttgatgcatctgttaggatatttgacgtgcgtacacctgat
aggctagtatatacagcaagaccacatgccccaagatcagaaaaggttgttggtatagga
tttcagcctgggtttgatccctacaagattgtaagtgcatctcaagctggagacattcag
ttccttgatgttagaagggcatctgaaccctacctcactattgaagcacataggggttca
ttaacggcattagctgttcatcggcatgccccagttattgcaagcggctcagccaagcag
atgatcaaagtgtttagtcttgaaggagaacagttgacaataattcgctaccagccatct
tttatgggtcaacgaataggcagcgtaaactgcctttctttccaccgatacaaatcactc
cttgccgctggtgctggtgataatgctcttgtttctatctacgcggaggacaattaccaa
gtacgatga
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