Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0134000
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Entry
Os12g0134000 CDS
T02163
Name
(GenBank) Similar to Hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00280
Valine, leucine and isoleucine degradation
dosa00650
Butanoate metabolism
dosa01100
Metabolic pathways
dosa04146
Peroxisome
Module
dosa_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Os12g0134000
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Os12g0134000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Os12g0134000
Enzymes [BR:
dosa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Os12g0134000
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-ProteinID:
BAF29112
RAP-DB:
Os12g0134000
UniProt:
Q0IQA3
B7ECU3
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All DBs
Position
12
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AA seq
377 aa
AA seq
DB search
MTATPTITSIAMVATIRRSFTAVLIHGICKANILIHPAMGWIWSSELFHGRFHQTTSNRR
NELTCSIMTVAMQHVLWDLPRFVKIVEVGPRDGLQNEKNTVPTSVKIELIHKLVASGLSV
VEATSFVSPKWVPQLADAKDVVEGIKHVPDVRFPVLTPNLRGFEAAVAAGAKEVAVFASA
SESFSKSNLNCTIKESLVRYHDVVTSAKKHGIRIRGYVSCVVGCPVEGTIHPSKVAYVAK
ELYDMGCSEISLGDTIGVGTPGSVLAMLEAVMSFVPVDKIAVHFHDTYGQALANILVSLQ
LGINIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNVDLNKLMDAGDYISKHL
GRQSGSKTTTALRKLTT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacaccaacaattacaagcatcgcaatggtggcaacaatcagacgatctttc
acagcagtgctcattcatggcatatgcaaggccaatatactgattcatcctgcaatgggg
tggatatggagttcagagctcttccacggaaggtttcatcagaccacctcaaatagaagg
aatgaactcacatgtagcattatgactgtggcaatgcaacatgttttatgggaccttcca
aggtttgtgaagatagttgaagttggaccacgggacggtctgcaaaatgagaagaatact
gtacccacatctgtaaagattgaactgatacacaaattggtggcttctggtctatcagta
gttgaagccacaagttttgtgtccccaaaatgggtgccacagctagcagatgcaaaggat
gtggttgaagggattaagcatgtgccagatgtgcggtttccagtgttaactcctaacctc
agaggatttgaggctgctgttgcagctggtgcaaaagaagttgcagttttcgcatctgcc
tctgaatccttttctaagtcaaaccttaattgtaccatcaaggaaagccttgttcggtac
catgatgttgtaacttctgccaagaaacatggaatacgaatccgtgggtatgtttcatgt
gtggttggttgccctgttgaaggcacaattcatccatcaaaggtagcatatgtagctaag
gagctttatgacatgggttgctcggagatctcactcggagacacgattggtgttggtaca
ccaggtagcgtacttgctatgcttgaagctgtaatgtcttttgttccagtggacaagatc
gccgtccatttccatgacacatacggccaagcccttgccaacatactggtctctctccaa
ctggggatcaacatagtggactcatcagtgtcaggactgggaggctgcccatatgcaaag
ggcgccaccggcaatgtcgcgacggaggacgttgtgtacatgctccatggactggggata
gagaccaatgttgacctcaacaagctcatggatgctggagattacatctccaagcatctg
ggaaggcagtcaggctccaagaccaccactgctctccgcaagctaaccacttaa
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