KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0180400
Entry
Os12g0180400      CDS       T02163                                 
Name
(GenBank) Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6)
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os12g0180400
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os12g0180400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os12g0180400
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os12g0180400
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Os12g0180400
  RNA polymerase III system
   RNA polymerase III
     Os12g0180400
  RNA polymerase I system
   RNA polymerase I
     Os12g0180400
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Os12g0180400
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-ProteinID: BAF29331
RAP-DB: Os12g0180400
UniProt: Q0IPN4
LinkDB
Position
12
AA seq 72 aa
MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLEKTETAG
NT seq 219 nt   +upstreamnt  +downstreamnt
atgatcatcccggtgcggtgcttcacctgcgggaaggtgattgggaacaagtgggatctg
tacctggatctcctccaggctgactacacagagggggatgctctggatgcattgggtttg
gtccgttactgctgccggcgaatgctcatgacccatgttgacctcatcgagaagttactc
aactacaacacgctggagaagaccgagacagcaggttaa

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