Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0230100
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Entry
Os12g0230100 CDS
T02163
Name
(GenBank) Similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment)
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dosa03110
]
Os12g0230100
Chaperones and folding catalysts [BR:
dosa03110
]
Heat shock proteins
HSP100
Os12g0230100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
UVR
Sigma54_activat
AAA_22
TniB
nSTAND3
NBD_SMAX1
AAA_14
AAA_18
Zeta_toxin
AAA_28
NACHT
AAA_25
RsgA_GTPase
IstB_IS21
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
BAF29461
RAP-DB:
Os12g0230100
UniProt:
Q2QVG9
LinkDB
All DBs
Position
12
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AA seq
919 aa
AA seq
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MAGTLLQPVALGTTFAGRVSGQRWKSHGTRRPPSMLAMSLSRPVKMAAFVGLRSVHSFSV
TPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI
LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLE
EARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMIGETTEAVGAGV
GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG
VGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS
DEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE
RRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLSYQYISDRFLPDKA
IDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEKAGELRDREMELKA
QITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSDESDKLLKMEET
LHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGS
EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD
VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSY
SRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQ
VTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKV
IVLNGQSGLPELSTPAVTV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagt
ggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttg
agccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtc
acgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgt
gctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttata
atgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaatt
ctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggc
ataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttc
gttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaa
gaagctcgtcagctaggacacaactatattggatctgagcacttgcttcttggactgctc
cgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaat
attcgcacgcaggttatccgaatgattggcgagactacagaagctgttggtgcaggagtt
ggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaaca
aaattagcagaggagggaaagctagatcctgttgttggaaggcaaccccagattgagcgt
gtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggt
gttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcct
gaaacaattgaaggaaagaaggtcattacccttgatatgggacttcttgttgctggtaca
aaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagt
gatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgag
ggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacagtgt
attggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaa
agacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctc
agagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctg
atttcagctgccaagctatcttatcaatacatcagtgatcgtttcctcccagataaagca
attgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggttcctgaa
gaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtc
cgtagccaggacttcgaaaaggctggagagttacgtgatcgtgaaatggaattgaaggcc
cagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggg
gagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggt
attccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagact
ttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgc
cgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggt
ccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatct
gaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaag
ttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggca
gttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagat
gtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaaga
acagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatc
gagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctac
agcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctc
aaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatc
gccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccag
gtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcg
aggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgcta
gctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtg
attgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtag
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