Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0277500
Help
Entry
Os12g0277500 CDS
T02163
Name
(GenBank) Similar to RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit) (CPN-60 alpha) (Fragment)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Os12g0277500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os12g0277500
03110 Chaperones and folding catalysts [BR:
dosa03110
]
Os12g0277500
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os12g0277500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os12g0277500
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Os12g0277500
Messenger RNA biogenesis [BR:
dosa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Os12g0277500
Chaperones and folding catalysts [BR:
dosa03110
]
Heat shock proteins
HSP60 / Chaperonin
Os12g0277500
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Os12g0277500
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os12g0277500
Exosomal proteins of other body fluids (saliva and urine)
Os12g0277500
Exosomal proteins of breast cancer cells
Os12g0277500
Exosomal proteins of colorectal cancer cells
Os12g0277500
Exosomal proteins of bladder cancer cells
Os12g0277500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-ProteinID:
BAF29586
RAP-DB:
Os12g0277500
UniProt:
Q2QU06
Q0INX9
LinkDB
All DBs
Position
12
Genome browser
AA seq
578 aa
AA seq
DB search
MASANAISTASLLRSFSSQGRVRRAKNGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLA
NAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSA
GDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKARPVKGSGDIK
AVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFV
TNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVN
KLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVTI
HQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAAT
ETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTTVPAIKETIEDHDERLGADII
QKALVAPASLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRCA
LQNAASVAGMVLTTQAIVVEKPKPKAPVAEPAEGTLTV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccaacgccatctccaccgcctccctcctccgctctttctcctcccagggg
agggtgaggagggccaagaatgggcgggcgcagcggctagtggtgcgggcggacgccaag
gacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaagctcgcc
aacgccgttggcgtcaccctcggcccacgagggagaaacgtagtgcttgatgagtacggc
agtcccaaagtggtaaatgatggagtcaccattgcccgggctattgagctatatgatccg
atggaaaatgctggtgcagcattgatccgtgaggttgctagcaagaccaatgattctgct
ggtgatgggactacaaccgcctctgtccttgctcgtgaaatcatcaagctgggccttttg
agtgtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcat
ggtcttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaa
gctgttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgct
attgacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagact
actgttgatgttgaagaaggaatggagattgaccgtggatacatttcccctcaatttgtg
acaaacctcgagaaatcgatcgtagagtttgagaatgctaaggttcttattactgatcag
aagatcaccagcataaaggagattcttccaatcttggagaagacaacacagttgagagct
ccactgtttattattgctgaggacattactggcgaagctttggcaacccttgttgttaat
aagctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgc
aaggctgtccttcaggatattgccattgtgacaggcgctgaatttctagcaaaagacctg
ggtttgctggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaata
catcagactacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagg
gttgcacagctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattg
gctgagaggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaact
gagactgagcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgca
gctattgaggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactacc
gtccctgcgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattatt
caaaaggcgttggtagctcccgcttcactgattgcccacaatgctggagtggaaggggaa
gtggtagttgagaagatcaaggacggcgagtgggaagtcgggtacaatgcgatgaacgac
aagtatgagaacttgattgaggcgggtgttattgacccagctaaggtgacgagatgcgcg
ctccagaatgccgcctcggtggctggaatggtccttaccacacaggccattgttgtcgag
aagccgaagcccaaggctcctgttgctgagccggcagagggaacccttaccgtctaa
DBGET
integrated database retrieval system
