Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0287200
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Entry
Os12g0287200 CDS
T02163
Name
(GenBank) Similar to Mago nashi protein
KO
K12877
protein mago nashi
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013
Nucleocytoplasmic transport
dosa03015
mRNA surveillance pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os12g0287200
09122 Translation
03013 Nucleocytoplasmic transport
Os12g0287200
03015 mRNA surveillance pathway
Os12g0287200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os12g0287200
03041 Spliceosome [BR:
dosa03041
]
Os12g0287200
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Os12g0287200
Spliceosome [BR:
dosa03041
]
Complex C
Other components
EJC/TREX
Os12g0287200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-ProteinID:
BAF29608
RAP-DB:
Os12g0287200
UniProt:
P49030
LinkDB
All DBs
Position
12
Genome browser
AA seq
160 aa
AA seq
DB search
MATGGAAGEDVPGGGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRK
EVFVSPSVLREARRIIQESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLV
DVQTSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcggcgccgccggcgaggacgtccccggcggcggcgagttctacctgcgg
tactacgtggggcacaaggggaagttcgggcacgagttcctcgagttcgagttccgcccc
gacggcaagctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaag
gaggtcttcgtctccccctccgtcctccgcgaggcccggaggatcatccaggagtccgag
attatgaaggaggacgacaacaactggccagagcccgaccgcgtggggaggcaggagctc
gagattgttatgggcaacgagcacatctccttcaccacctccaagattggctccctcgtc
gacgtccagaccagcaaggaccctgagggcctccgcatcttctactacctcgtccaggat
ctgaaatgtttcgtgttttcactcatcaatctccacttcaagatcaagcctattcaatct
tga
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