Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0479400
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Entry
Os12g0479400 CDS
T02163
Name
(GenBank) Similar to Auxin response factor 1
KO
K14486
auxin response factor
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
Os12g0479400
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-ProteinID:
BAF29784
RAP-DB:
Os12g0479400
UniProt:
Q2QQX6
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Position
12
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AA seq
840 aa
AA seq
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MAAAATAAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIE
QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQDGNGSGN
GNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ
HPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGE
LRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPR
DLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDE
AASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVASKVMAN
SQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQEKNNVSVQRELGSQSWM
QMRRPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTWNTINVHYPDQNANHNMYPGT
WSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIE
PSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGKL
QQDALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQ
GIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWN
EFCNMVHKIFIYTREEVQKMNPGALNSRSEDSRSTSVERGLVGEGLQGGLSTPSLNSENC
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagcgacggcggcggcctcgccggttgaggggctcaccggcggcggcggc
ggtggtggtggaggagtggacgggctgttcgtggagctgtggcgcgcgtgcgcggggccg
ctggtgacggtgcccgccgtcggggagagggtcttctacctcccgcagggccacatcgag
caggtggaggcatcgacgaaccaggtcgccgagcagcagggggctccgctctacaatctg
ccatggaagatcccgtgcaaggtcatgaacgtcgagctcaaggctgagcctgatacggat
gaggtgtatgcgcagctcaccctgcttccggagaagcaggatgggaatgggagtggtaac
gggaatgtgtccaaagacaaggtggaggaggaagaggtggtgccaccagctgcaactgag
cggccccgggtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggt
ggcttctcggtgctgcgccggcacgcggatgagtgcctcccaccactggatatgagtcag
catcccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgt
cacatcttccgaggtcagccacgaagacaccttctccagagtggttggagtgtttttgtg
agtgccaaacgccttgttgctggagatgccttcatatttctcagaggtgagaatggggaa
ctacgagttggagttcggcgtgcaatgagacaacaagctaatattccatcttcggtcata
tcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgcagtgaacactgga
accatgttcactgtgtactacaagccaaggactagtccatctgaatttgtggtaccacgt
gatctgtacaaggaatctctgaaacgaaatcattcaatagggatgagattcaagatgaca
tttgaaggcgaagaggctgcagagcaaagattcactggcacaattgttggagtaggtgat
tctgacccatctggttgggctgactcaaaatggcgttcccttaaggtgcgatgggatgaa
gctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacctgctaacagc
ccttcccctgtcaaccctcttccagcaccccgaaccaagcgggctcgtccaaatgtttta
gcttcctcacctgacttgtctgctgtaaacaaagaagttgcttcaaaagtcatggcaaac
tcgcagcaaaatggtcttccaagggccttccacagtcaagaaaacatgaatttgagaagt
cgttttggtgatagcaatgagctaaatacttcccaaaagcttaccatgtggtcttcagga
agcaatcaagagaaaaataatgtttctgtccagagggagctaggttcacagagttggatg
cagatgagaaggcctgatggttcctctgagatattatctggatttcaaccactgaaagat
acgcggaaccctctgagttcatttcctagtcagatatctggaaaccgttcaaatacgtgg
aacacaatcaatgttcattatcccgaccaaaatgccaatcataatatgtaccctggcaca
tggtctcttatgcctccaaacactggttttggtgtgaatcagcagaactacctaatgacg
cctgacatcacactccctcaaaggtctcttaatgccaagtttggtgggaatggagcattc
acttcgcttcgggcccatggcatagatcagcgctcctctggttggcttgggcatattgag
ccaagttctcacattgatgatgcctcatcgagtcttatcaagccacagcctttggttatt
gatcacaatgttcagaaagctaaaggctcttcatgcatgctatttgggatttctcttgac
agccctgcaaaacctgaactattgatatccccaccaagtgttgcatttgatgggaagctc
caacaggatgcacttgaagaggatgaatgctctgatccttccaagactgtgaagccactt
gatggagctcagcacgattctgctagagagaaacatcagtcatgtccagatggtaccaaa
aacattcagagtaaacagcaaaatggttcctcccgaagttgcaagaaggtccacaagcaa
ggaatcgcactcgggaggtcaatagatcttacaaagttcacttgctatgatgagttgatt
gctgaactggaccagatgtttgacttcaatggtgagctgaacagttcaagcaagaactgg
atggtcgtttacactgataatgagggtgacatgatgttggttggtgatgatccttggaat
gaattctgcaacatggttcataaaatcttcatctacacgagggaggaggtccagaagatg
aatccgggtgccctaaactcaaggtcagaggatagccggtctacttccgtggaacgaggg
ctagttggcgaagggctccaaggtggtctatccaccccatcactgaattctgagaactgc
taa
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