Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0497300
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Entry
Os12g0497300 CDS
T02163
Name
(GenBank) Similar to DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440
Homologous recombination
dosa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Os12g0497300
03460 Fanconi anemia pathway
Os12g0497300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os12g0497300
04121 Ubiquitin system [BR:
dosa04121
]
Os12g0497300
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os12g0497300
Membrane trafficking [BR:
dosa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
Os12g0497300
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
Os12g0497300
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
Os12g0497300
RecA family proteins
Os12g0497300
FA (Fanconi anemia) pathway
Other FA pathway factors
Os12g0497300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
AF1548-like_C
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BAF29825
RAP-DB:
Os12g0497300
UniProt:
Q8RV34
Q0IN90
LinkDB
All DBs
Position
12
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AA seq
341 aa
AA seq
DB search
MSSSGAAAAAAATAEEAAAGGEHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPR
KDLLQIKGISEAKVDKIIEGASKLVPLGFTSASQLHAQRLEIIQVTTGSRELDKILDGGI
ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADR
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAIMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFGPQIKPIGGNIMAHASTT
RLFLRKGRAEERICKVVSSPCLAEAEARFQISPEGVTDVKD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgggtgcggctgcggcggcggcggcgacggcggaggaggcggcggcgggc
ggggagcacgggccgttccccatcgagcagctccaggcatctggtatagctgcacttgat
gtgaaaaagctcaaagatgctggtctctgcacggtggagtctgtggtctactcaccaagg
aaagaccttctgcaaattaaagggattagtgaagccaaagtcgataagataattgaagga
gcttcgaagctggttccactgggatttacaagtgccagccaacttcatgcacagagactt
gagattatccaagttacaactggatcaagggaacttgataaaatcttggatggtggaata
gaaactgggtccattacagagatatatggtgaatttcgctcagggaagactcagttgtgc
cacactctgtgtgttacatgtcagctcccattggaccaaggtggtggtgagggaaaagct
ttgtatattgatgcagagggcacattcagaccacaaagactcctccagatagcagacagg
tttgggttgaatggtgctgatgtacttgagaatgtagcttatgcaagagcatataatact
gatcatcaatcaagacttttactggaagcagcttccatgatggtggagacaaggtttgct
attatgattgtagatagtgcaacagccttatacagaacagatttctctggtagaggggag
ctgtcagcaaggcaaatgcacctggccaagtttcttaggagccttcagaagttagcggat
gagtttggcgtggcggtggtaatcacgaatcaagttgtggcgcaagtggatggtgctgca
atgtttgggccacagatcaaacctatcggcgggaacatcatggctcatgcttccacaaca
aggctttttcttcgaaagggaagagcggaggagcggatatgtaaggtagtaagctctccc
tgtcttgctgaagctgaggcgaggtttcagatatcaccggaaggcgtcacagatgttaag
gactga
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