Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0548300
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Entry
Os12g0548300 CDS
T02163
Name
(GenBank) Similar to Nucleoside diphosphate kinase II, chloroplast precursor (EC 2.7.4.6) (NDK II) (NDP kinase II) (NDPK II)
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00230
Purine metabolism
dosa00240
Pyrimidine metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01232
Nucleotide metabolism
dosa01240
Biosynthesis of cofactors
dosa04016
MAPK signaling pathway - plant
Module
dosa_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
dosa_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
dosa_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Os12g0548300
00240 Pyrimidine metabolism
Os12g0548300
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
Os12g0548300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os12g0548300
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
Os12g0548300
Membrane trafficking [BR:
dosa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
Os12g0548300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
BAF29990
RAP-DB:
Os12g0548300
UniProt:
Q0IMS5
A0A0N7KU64
LinkDB
All DBs
Position
12
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AA seq
220 aa
AA seq
DB search
MDAMAVLARTSRPAPTLLAATSPAVSRRPAAVSFAAAASPGSRGRVALSAAWGGRAARGR
VSAAGRIVASSVEQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHY
KDLKEKPFFPGLIEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQT
GRNVVHGSDSPDNGKREIALWFKEGELCEWESVLTPWLVE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatggccgtgctcgcgaggacctcccgccccgccccgaccctcctcgccgcg
acctcccccgcggtgtcccggcgcccggcggccgtctccttcgccgccgccgcctccccg
gggtcccgcggccgcgtcgcgctgagcgccgcgtggggcgggagggcggccagggggcgc
gtctccgccgccggccgcatcgtcgcgtcgtcggttgagcaatcctatattatgatcaag
cctgatggtgttcagcgaggcctggttggcgagattatttcccgtttcgagaagaaaggc
tttgtgttgaagggcttaaagctttttcagtgccccaaggacttggcacaggagcactac
aaggatttgaaggaaaaacctttctttcccggtctgatcgagtacataacttctggccct
gttgtttgcatggcttgggaggggaatggtgttgttgcatcagctcgcaagttaatagga
gctactaatccccttcaagctgaaccagggaccatacggggcgatcttgcagttcaaaca
ggaaggaatgttgtccatggaagtgacagtcctgataacggcaagcgtgaaatcgctcta
tggttcaaagaaggcgaactctgcgaatgggaatctgttctgacaccatggcttgtagag
taa
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