Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0552700
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Entry
Os12g0552700 CDS
T02163
Name
(GenBank) Leucine-rich repeat, cysteine-containing subtype containing protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os12g0552700
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
Os12g0552700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
LRR_14
Motif
Other DBs
NCBI-ProteinID:
BAF30003
RAP-DB:
Os12g0552700
UniProt:
Q0IMR2
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All DBs
Position
12
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AA seq
362 aa
AA seq
DB search
MRQSFLSNLAKLKDTLTVLRLDGLEVSSSVLLAIGGCNNLVEIGLSKCNGVTDEGISSLV
TQCSHLRVIDLTCCNLLTNNALDSIAENCKMVEHLRLESCSSISEKGLEQIATSCPNLKE
IDLTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFISSSCGKLIELDLYRCNSIT
DDGLAALANGCKKIKMLNLCYCNKITDSGLGHLGSLEELTNLELRCLVRITGIGISSVAI
GCKNLIEIDLKRCYSVDDAGLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDVK
MVHLSWVSIEGFEMALRAACGRLKKLKMLSGLKSVLSPELLQMLQACGCRIRWVNKPLVY
KD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtcgtttctgtccaacttggcaaaactgaaggataccttgacagtgcttaga
cttgatggtcttgaagtctcatcctctgttcttctggccattggtggttgtaataacttg
gtcgagattggccttagcaaatgcaatggcgttacagatgaaggaatctcttcacttgta
actcaatgcagccacttaagggttattgatctcacatgctgtaacctccttaccaacaat
gcccttgattcaatagctgagaactgtaagatggttgaacatctccgtttggaatcctgt
tcttccataagcgaaaagggactggagcagattgcaacctcctgccccaatctaaaggag
atagacctcactgactgtggagtgaatgatgcagcattgcagcacttggccaagtgctct
gaactgcttgtactgaaattaggcctgtgctcaagtatttctgacaaaggtcttgctttt
atcagttcaagctgtggaaagctgattgagcttgatctctatcgctgcaattctattacc
gatgatgggctggcagctttagctaatggctgcaagaagattaagatgctaaacctatgc
tactgcaacaagattaccgacagtggtttgggccacctaggctctctagaggagctcaca
aaccttgaactgaggtgcttggtccgtataacaggtattggaatctcatcagttgccatc
ggctgcaagaacctgatagagatagacttgaagcgttgctattctgtcgatgatgctggc
ttgtgggctcttgcccgatatgcactaaaccttagacagcttactatatcatactgccaa
gtcactggcctgggcctgtgtcacctgttaagctccctgaggtgcctccaggatgttaag
atggtacacctctcatgggtctctatagaagggttcgagatggcactgagagcggcttgc
gggaggctgaagaaactgaagatgctgagtgggctgaagtctgtgctgtctcctgagctg
ctccagatgctgcaggcctgcggctgccgcatccgttgggtcaacaagcctcttgtctac
aaggactaa
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