Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0574400
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Entry
Os12g0574400 CDS
T02163
Name
(GenBank) Similar to BPM
KO
K17943
pumilio RNA-binding family
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-ProteinID:
BAF30119
RAP-DB:
Os12g0574400
UniProt:
Q2QN93
Q0IME6
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Position
12
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AA seq
1274 aa
AA seq
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MAARGGGGRPPASRRRRRKPRGGRMERVSTPARLRRPPRLDAAEWFDIPGEHMSAPDEKA
PTEVAGMPFSWDMQSEAAKYFGNFDTEIQASCQTQEPSYRAIYGSCNSGQMIGLGDSQYK
LAGSSSSQSLYSDNFSDATGFNQLKLQKQTSADGNTESWSELNRDAIGGLSGKGSPLAKS
GKQLEQRMAKALSAQPYHPVFPVTQGVSSSNSSSQHVVSSSGEAKYIGNSGQEMQVACET
AKEPSHRALYGSKNPYQLTGLSDLRDKIIASSSFEGVNTGSLTSTLSGMNLPTNSAKENT
EYNQLKLQKQIDGYQRFESGSGLNRDDAGDITVTGVPQQVQVGQNMVNALSAKPYHPVFS
VSHGTSASSSSQHPYMARQLLEHPEYNPRMHRTHPSLQPTIEAASTSMTSHVKEPCYQEN
VGDSNPGMSLLRSTAVSSRDVENKSPNLGDRVHADVSEIYSTLDHQTSANSMQIQYAPQV
VRQPSQQSLHSDVTETYSAFGHQSAASNIQRQFAPRVTRQASHRSLYESSNSSLWTGPHD
DSQMELFRPSSSRRISTNVISGELPRINLQSETMMGNADFNQQNLRRQISLRENTESHSF
GTYNELPRTSSFLRRQSSESSQLNSASVKCSPGSGSSSTTMGPPRPFNTVSGGASSLLGS
PLSSMSGGSSSGGNPDHQGTVLSSIYQPDGYNINSTLPLRMRTHAREAYATSVLPQATRR
SHQVNFDSAERRPQYVQQRGLDDTINSNMLSARQQFQRQVERQLQRQLERQLQRQLERQL
QRQVQRQLQRHHERAAASEAHPFYGNDETSVRMNPTEEFLDIVKDHEAFFLSFYHPSRIP
ARVMNTVDQCYGVDMEREMPHQESHPTPGCGTELSHKNDTSGFERSDVDVAHIHDSKRLN
NEELNALLLHRKFSSLNKGNYRLFHIEGHVLQCSIDQCGSRFIQQKLPTATPDEKLMVFK
EIMPHFLEMVTDVFGNYVLQKMIEHGAPFQRREITACLFGSVSSLSCQLYGCRVVQRAVE
LSDLDQKIQIAKELNSNIMKCIHDPNANHVVQKCIEHVPPRFIQFFVESMYGRVVELSVH
PYGCRVIQRILEYFDSSIQEIFLEEIIEEVYYMAKDQYANYVVQNILQHGKALVRSAIIK
KFIGRVVAMSKQKFASNVIEKCLIFGSYDEKQKIINEVIGTTDLVRSGETEALVVMVNDQ
YANYVVQKVIETCDEWQRKLILRRLRAHHSLLHDCTYAKHVVARLDRLIDIGERKMANPR
RPRRHGKDPVPPLT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcggcggaggcgggcgaccgccggcgtcgcgccgccgtagacggaagccg
cggggagggaggatggagcgggtttctactcccgctcgtctccgccggccgccacggctg
gatgccgccgagtggtttgatatcccaggtgaacacatgtccgctccagatgaaaaggcg
cctactgaggttgcaggcatgcccttttcttgggatatgcagtctgaagcagccaaatat
tttggaaactttgacacagagatccaagcttcttgtcagactcaagaaccatcatacaga
gccatttatggaagctgcaattctggccaaatgattggactaggggattcacaatataaa
ctggctgggtcatcctcatctcaaagcctctatagtgataacttctctgatgccactgga
ttcaaccagctgaagcttcaaaaacaaacaagtgctgatggaaacaccgaatcctggtca
gaactgaacagagatgccattggaggtttatcaggtaaagggagtccactagccaaatca
ggaaagcagcttgagcaacgtatggcgaaggctctttctgctcagccataccaccctgta
tttcctgtgactcaaggtgttagttccagcaattcatcttcccaacatgttgtgagttca
tcaggagaggccaaatatattggaaattctggtcaagaaatgcaagttgcttgtgaaact
gcaaaagaaccatcacatagagccttatatggaagcaaaaacccttatcaactgactgga
ctcagtgatctccgtgataaaatcattgcctcatcttcatttgaaggagtcaatactggt
agcctcactagcactttgtcagggatgaacttgccaaccaacagtgctaaagaaaacact
gaatacaaccaactgaagcttcagaaacaaatagatggttatcagaggtttgaatcaggc
tcaggattaaacagggatgatgctggagatataactgtaacaggagttccacaacaagtg
caggttgggcaaaacatggtaaatgctctttctgctaagccctaccatcctgtgttttct
gtctcacatggtacaagtgccagttcatcttcacaacacccatatatggcgagacagttg
ctagagcaccctgaatacaatccaaggatgcatcgcacccatccttcattgcaaccaaca
atcgaagctgcatccacctcaatgacatcccatgttaaagagccctgttaccaagaaaat
gttggggatagcaacccaggtatgtccctgcttcgcagcacagctgtttcctccagggat
gtagagaacaaatctcccaacctgggtgatagggtgcatgctgatgtttcggaaatatac
tccactttggatcaccaaacttcagctaacagcatgcagattcagtatgctcctcaggtt
gtaaggcaaccatcacaacagtccctgcattctgatgttacagaaacatattcagctttt
ggtcatcagtctgcagccagcaatatacagaggcagtttgctcctcgggttacaagacaa
gcatcacacaggtccctatatgaaagcagcaatagcagtctatggactggacctcatgat
gattcccagatggaactgttcaggccatcctcgtctcgcagaattagtactaatgtcatc
tctggtgaattgccaaggatcaacttgcagagtgagacaatgatgggaaatgctgatttc
aaccagcaaaatcttcggagacaaatttctctccgtgaaaacactgaatctcactctttt
ggcacatataacgagttgccaagaacatcttcctttttgcgccgtcaaagctctgaatcc
tcacaactgaatagtgcttctgtcaaatgttcaccaggttctggtagctcatcaaccacg
atgggtcctcctcgccctttcaatacagtatcaggaggtgccagttctctgctaggaagt
cctctttcttccatgtctggaggttcaagttctggtggtaatcctgatcatcagggcact
gttttatcttcaatataccaaccagatggatacaatattaattccaccttgcctctaaga
atgagaacacatgcaagggaggcctatgccacatctgttctacctcaagccacaaggcga
agccaccaagtgaactttgattctgcagaacggagaccccaatatgttcaacaaaggggt
ctggatgacactataaattcaaacatgttgagtgctcggcagcagtttcagaggcaggtt
gaaaggcagcttcagaggcaacttgaaaggcaacttcagaggcaacttgaaaggcaactt
cagaggcaggttcaaaggcagcttcagaggcatcatgagagagcagctgcatctgaagca
catccattttatggcaatgatgagacttctgtcaggatgaacccaactgaggaatttctt
gatatagtaaaggatcatgaagcattcttcctttcattttatcatccttctcgtattcca
gcccgtgtcatgaatacagtagatcaatgctatggtgttgatatggaaagggagatgcca
catcaagagagtcatccaacacctggctgtggtactgagctttctcataagaatgacact
tcaggttttgaaagatctgatgtggatgtcgcacacatacatgattccaaaaggctaaat
aatgaggaactcaatgcccttctattacataggaagttcagcagcttaaacaaagggaat
taccggctttttcacatagaaggccatgtgcttcaatgcagcattgatcagtgtgggagc
cgctttatacagcagaagcttccaacagcgacacctgatgagaaactcatggtctttaaa
gaaatcatgcctcattttcttgaaatggtgactgatgtatttggaaattatgtgctgcaa
aagatgatcgagcatggagccccatttcaaagaagggaaattacagcttgcctttttgga
agtgtttcgagcttaagctgtcaactatacgggtgtcgagtagtccagagggctgtagag
cttagtgatctagatcagaagatacagattgccaaggagctcaatagtaatatcatgaaa
tgtatacatgacccaaatgcaaaccatgttgtccagaaatgtatagagcatgtgccacca
cgattcatacagttctttgtggagagcatgtatgggcgtgttgtggagttatcagtccat
ccatacggatgccgtgtcatccagagaattctggagtactttgattcatcgatccaggag
atctttctagaagagattatagaggaggtttactatatggcgaaagatcaatacgctaac
tatgttgtgcagaacatattgcagcacgggaaagcccttgtgcgatctgcaattataaag
aaatttattgggagagttgtggccatgagcaagcaaaaattcgcctctaatgtcattgaa
aagtgcttaatatttggtagctatgatgaaaaacagaagatcattaatgaggtcatcggc
acaacggacctcgtcagaagtggtgaaaccgaggctcttgtggttatggtgaacgaccaa
tatgctaactacgttgtacagaaggtgattgaaacctgcgacgagtggcagcggaagcta
atactcaggcgcttgagggcgcaccacagcctgcttcacgactgcacctatgcaaagcac
gtcgtggcacgactggataggctcatcgatatcggggagcgcaaaatggcgaatcccagg
cgccccaggcgacatgggaaagatcctgtgccaccactgacctag
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