Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0578400
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Entry
Os12g0578400 CDS
T02163
Name
(GenBank) Glycoside hydrolase family 79, N-terminal protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00531
Glycosaminoglycan degradation
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
Os12g0578400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dosa00536
]
Os12g0578400
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
Os12g0578400
Glycosaminoglycan binding proteins [BR:
dosa00536
]
Heparan sulfate / Heparin
Enzymes
Os12g0578400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-ProteinID:
BAF30141
RAP-DB:
Os12g0578400
UniProt:
Q2QN56
Q0IMC4
LinkDB
All DBs
Position
12
Genome browser
AA seq
539 aa
AA seq
DB search
MRLWFLIPLLLCFPTLIRSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNYDQC
PWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTPFSKSSSGL
FGFSQGCITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEY
TVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGF
YDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTI
QRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNY
GLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLN
KNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQD
GNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCER
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaggctatggtttctcatacctcttcttctctgtttccctacattgattcgatccgag
gattactcggatgtgaccatcgtcgttcggggtgctgagacgatcgcttcgaccagcaac
gagttcatttgcgccaccattgattggtggcctccagagaagtgcaattatgaccagtgt
ccatgggggcaagcttctatcttaaatttggacttgactaatcctttgctagctaaagct
atccaagcctttagccctctacgtatcagacttggaggttccttacaagatcaggtggtg
tatggcacgccgaatttaggatctccatgcaccccattttcaaagagttcaagtggcctg
tttggattttctcaaggatgcataaccatggaaagatgggatgctattaataagatcttt
atggatacaggtgcagttgttacattcggccttaacgcgcttcaagggcgacagcagatg
ggcagaggtgtttggggaggtgcttggaattccagtaatgctcgggagttcatggagtac
actgtttcgatgaactaccctatagactcatgggaatttggtaatgagttgagtggaagt
ggaattggtgcaagtgttggagctgaacaatatggaaaagatataattgagctcaagaac
atcatcagccagttatatggaaactctaggaaaccattggtggttgccccaggaggattc
tatgaccaaaaatggtatgctcagcttcttgatatctctggtccaaatgttctcgacaca
atgactcatcatatttacaatcttggtgctggtaacgatccgcaagttgcaaataggatc
ttgaatccgcagtatttgagccagagctctgatacattcagagatctccaaatgacgata
cagcggcatggaccatggtctgctccctgggttggggaagctggtggtgcatataacagt
ggcagccgaaaagtgtctaatactttcctgaatagcttctggtatcttgatcagcttggt
cagtcagcaaagtatgacacaaaggtttactgcagacagactttgattggaggcaactat
ggccttcttgataccgaaacttttgttccaaaccctgattactacagtgccttgctgtgg
catcggctcatggggaagggagttatttccttagacaccagcggttcttcgtacttgcgt
gcctatgcgcattgcggaaagcaaaagggcggcgtcgcgctcctcatgctcaacctgaac
aagaacatgggattcatggtctcagtcagaaatgacctcaacattaatttcagagaaatg
gcagggataaagagggacaactcctttgtccatggcctgaagaggacagtctcctgggtt
gggagcaaagcctcggatgggctggagaagagggaggagtaccatctgactccacaggat
ggcaacccttttgccaggacagtgctgctcaatggagctcctcttcagctcactggagat
ggtgacatcccttcactgccaccagtgatggtctcagtcaattccccaatctatgtcgcc
ccgctgtcgatcgcgttcgtcgtcttcccagatttcgaggctgaaggttgcgaacgatga
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