Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0615800
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Entry
Os12g0615800 CDS
T02163
Name
(GenBank) D111/G-patch domain containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os12g0615800
Spliceosome [BR:
dosa03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Os12g0615800
Other components
Complex C specific factors
Os12g0615800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-ProteinID:
BAF30296
RAP-DB:
Os12g0615800
UniProt:
Q2QM64
Q0ILW9
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All DBs
Position
12
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AA seq
844 aa
AA seq
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MEEDAEGMDRFDMDGDFEGGRFGRDGEFYYERRRERAPQTRDDALYGVFAEGDSDYDSDD
GRRRSRRKRRRDEAEPDLSRPVHFQSAGKFMPSKEPEPELEERPGLGAAASASASASAAG
EDDAAEEEEDLDLPTAFGQRIAEGARARREERARERETAARRRQASGVASGKPAPALGSL
GSNTKVAKMMAMMGYKDGMGLGKNEQGIVAPVETTLRPKNAGLGSVEGFKEPKPFFTKEN
LPPPPPPAPAKKEQQRWSKKAGAKKGPVLTKNELLAMRSEQEQDEQPTVVQKVIDMRGPQ
ARVLTDLKGLNVEQEMEANDVPMPELQYNVRLLVDEAKADIVRLDGQLRREQEKVASLVR
EKEKVAKQEALQKRQLQVMEKIAGVLEQVRVDDTAGILSLEGLLKTFQELKACYVEEFKM
CSVAWIACRFAHPLLIRVFQGWQPLQNPLFGLEIMSSWKDLLQGDQAYDFSGDVESMAPY
AQLVCEVILPAVRISGTNSWEARDPEPMLRFLESWERLLPPIVLQSILEHVIMPKLSAAV
DSWDPRREKVPIHVWVHPWLPMLGQRIDTLCHSIRYKLSSVLHVWQAHDASAYAVLSPWK
DVFDAASWEDLIVRYIVPKLKMALQEFQINPANQKLDQFNWVMIWASAIPVHHMVHMLEV
DFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMMNRAA
EGLEVVQPGARENVGYLRATEKRQFDAAQQASQYMTHHAVPGAAMADMSFKESIQAYAMD
QGLLFMPRVGKFYNGMPVYEFGTVSICIDSVKRLLYAQLQEGIERWSAVSLTQLIEMNRK
ARQR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggaggggatggaccggttcgacatggacggcgacttcgagggcggc
cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg
cgcgacgacgcgctctacggcgtcttcgccgagggcgactccgactacgactccgacgac
ggccgccgccgcagccgccgcaagcgccgcagggacgaggccgagcccgacctctcgcgc
cccgtccacttccagtccgccggcaagttcatgcccagcaaggagcccgagcccgagctc
gaggagaggcccggccttggcgccgctgcctccgcctccgcctccgcctccgcggcgggt
gaggatgatgcggcggaggaggaggaggatctcgacctgcccacggcgttcgggcagcgg
atcgcggagggcgcgagggcgaggcgggaggagagggcgcgggagcgggagacggccgcg
cggcgcaggcaggcgtcgggggtggcctccgggaagccggcgccggctctggggagcctg
gggtccaacacgaaggtggccaagatgatggccatgatggggtacaaggatgggatgggg
ctcggcaagaacgagcaaggtatagtcgcgccggtggagaccactctgcgccccaagaac
gccggtctcggaagcgtcgaggggttcaaggagcccaagccattctttactaaggagaat
ttgccgcctccgcctccaccggcgcccgccaagaaggagcagcagaggtggtcgaagaag
gccggtgcgaagaaaggccccgtgctgacgaagaacgagttgctggcgatgcgcagcgag
caggagcaggacgagcagcctacggttgtgcagaaggtgatcgacatgcgagggcctcag
gcacgcgtgctaacggacttgaaggggctcaacgtggagcaggagatggaggcgaacgat
gtgccgatgccagagttgcaatacaatgtgaggctgcttgtcgatgaggccaaggctgat
attgtgaggctggatgggcagctgcgacgggagcaggagaaggtggcaagcttagtgcgg
gagaaggagaaagtggcaaaacaggaggctttgcagaaacgccaactacaagttatggag
aagattgcaggagtgctggagcaggtccgagtggatgatactgcaggtattctctctctg
gaagggttgcttaagacctttcaggaattgaaggcatgctacgtggaggaattcaagatg
tgcagtgttgcatggattgcctgccggtttgctcatccgctactaatccgagtcttccag
gggtggcaaccactgcaaaatccgttgtttggcttggagatcatgtcatcatggaaagat
ttgctgcagggggatcaagcatatgacttctcaggtgatgttgaatcgatggctccatat
gcacaattggtttgcgaggtcatcctacccgctgtgaggatatcaggaaccaattcatgg
gaggctagggatccagaaccaatgcttcggtttcttgaatcatgggaacggttgctgccc
cctatcgtgctccagtcaatattggagcatgtcataatgccaaagctttcagctgcagta
gattcttgggacccacgcagggagaaggtaccaatccatgtatgggtgcatccatggttg
ccaatgctaggacagaggatagataccttgtgccattctattcgatacaaactgagtagt
gttctccatgtttggcaagctcacgatgcatcagcctatgctgtgttgtctccatggaag
gatgtatttgatgccgcaagctgggaagacttgattgtgcgttatatcgtaccaaaattg
aaaatggcacttcaagaatttcagatcaaccctgcaaaccagaaactcgaccagttcaac
tgggtaatgatttgggcttctgcaattccagtacaccatatggtccatatgttggaagta
gatttcttcagcaagtggcagcaggtcctgtaccattggctgtgttcaccaaatcctgat
ttcaatgaaatcatgaactggtacaagggctggaagggccttttcccaccagaattgctt
gccaatgagcgcatacggatgcttttaacggctggccttgacatgatgaaccgagctgct
gaaggccttgaggtggtgcaacctggcgctagggaaaatgtgggctacttgagagcaaca
gagaagaggcaatttgatgcagcacagcaagcatcacaatacatgactcaccatgcggtg
ccaggagcagccatggcggatatgagctttaaggagtctatccaggcatatgcaatggac
caaggcttattgtttatgcccagagttggtaaattctacaatggtatgccagtgtatgag
tttggcaccgtaagtatttgcatcgactctgtgaagcgcctactctacgcacaacttcaa
gaaggaattgagagatggagtgctgtctctcttacacaattgatagaaatgaaccggaag
gcgaggcaacgctag
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