Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0622500
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Entry
Os12g0622500 CDS
T02163
Name
(GenBank) Spo11/DNA topoisomerase VI, subunit A family protein
KO
K10878
meiotic recombination protein SPO11
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os12g0622500
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
Os12g0622500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
nSTAND_NTPase4
Motif
Other DBs
NCBI-ProteinID:
BAF30326
RAP-DB:
Os12g0622500
UniProt:
Q2QM00
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Position
12
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AA seq
487 aa
AA seq
DB search
MDDSTDDDSYHPRKHYAYDRQVSSSRWRTSREYIRGPGPETHTTESAQDGQDPPAGVYSY
GYFSGSGNDPQVQGHFVPEIQKYNPYVIFKGEQLPVPIWELPEEKVQDFHDRYFIAKDKS
RVEARKTLNRLLEGNINTIERGHGYKFNIPKYTDNMEFNEEVKVSLAKAGKTISRSFCNA
NQREVASRTGYTIDLIERTLGAGLNISKRTVLYTNKDLFGDQSKSDQAINDICALTNIRR
GSLGIIAAEKGIVVGNIFLELTNGKSISCSIGVQIPHRLDQIKDVCVEIGSRNIEYILVV
EKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLCDPDPEGIS
ILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSREDKTMLKNLWQ
DDLSDVWKRRIEEMISFDKKASFEAIHSLGFDYFATNLLPDMINKVREGYVQVQEKKEPQ
DTEASED
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcaacggatgacgattcgtatcatccaagaaaacactatgcttatgatcgt
caggtttcttcaagcagatggcgtaccagccgcgagtatatcagaggtcccggccccgaa
actcatactactgagagtgctcaagatggacaggatccacctgctggagtatattcctat
ggttatttttctggcagtggtaatgatcctcaagttcaaggacactttgttccggagatt
caaaagtacaacccttacgtgattttcaaaggtgaacaactcccggttcctatatgggaa
ctgccagaggagaaggtccaagattttcatgataggtactttattgcaaaagacaagagt
cgagttgaagccaggaagactctgaataggttgttagaggggaacatcaatacaattgaa
aggggacatggatataaattcaatattccaaaatatacagataacatggagtttaatgag
gaagtcaaggtttctctagcaaaagcaggcaagaccataagccgttccttttgcaatgcg
aatcagcgggaagttgcatctaggactggctataccattgatctaatagaacggacactt
ggggctggattgaacatctcgaagagaactgtcttatacacaaacaaggatctgtttggg
gatcaaagtaaatcagatcaagcgatcaatgacatctgcgctttgacaaatatcagaagg
ggctctttgggtataatagcagctgaaaaaggaattgtagttggaaacattttcctggaa
ttgacaaatggcaaatcgattagttgttctattggagtgcagataccacacaggcttgac
cagatcaaagatgtttgtgttgaaataggttcacgcaacatagagtatattcttgttgtg
gaaaagcatacaatgttgaattatctactagagatggactatcacaccaataacaactgt
ataattctgacaggatgtggcatgccaaccctccaaacaagggatttcctcagattcttg
aaacaacgcactggactacctgtctttggactttgtgatccagatcctgaaggtataagt
attcttgctacgtatgctagagggtcttgcaattcagcatatgacaatttcaatatttcc
gtgccatctatttgttgggttggattgtcatcctcagacatgataaagttgaatttgtct
gagaccaactactcacgtttgtctcgcgaggacaaaactatgttgaagaacctttggcag
gacgatttgtccgatgtatggaaacgcagaatcgaagaaatgataagttttgacaagaag
gcctcttttgaagctattcatagtttggggtttgattattttgcaaccaatttgcttccg
gatatgattaacaaagtacgagaaggctatgttcaggttcaagagaaaaaagagcctcaa
gacactgaagccagtgaggactga
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