Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0624200
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Entry
Os12g0624200 CDS
T02163
Name
(GenBank) Sodium/calcium exchanger membrane region domain containing protein
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os12g0624200
Transporters [BR:
dosa02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
Os12g0624200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
DUF6755
Motif
Other DBs
NCBI-ProteinID:
BAF30335
RAP-DB:
Os12g0624200
UniProt:
Q0ILT0
LinkDB
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Position
12
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AA seq
587 aa
AA seq
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MAAFLRTLHRRRTRNAAAAAFLALAVVVVVFFLSVFVATRNEADIFFSGVAAASSSSPDS
SSGGCRELQALDGDGARCRYLRAHAPCAPVGYVDYLRLLYCGFGRAPWLGYAALALWLLV
LFYLLGDTASAYFCASLEGLSAVLRLPPAIAGVTLLSLGNGAPDVLSSVVAFAAGARGGD
GGGGGGEDAGDVGLSGVLGGALFVSTVVAGVVAIVAGRRGGGEPVIIERRGFVRDVCFLL
VALCYLLAVLLTGAVTVWSAASFLSLYAGYVLLVWTSHCCANASDELEVDDTKQPTSDLA
APLLVVDDDDASPPPLPVSSSSKPTSAPRTFARRLVDLLHSPLYLPRRLTIPDIAAHRWS
KPTAVATALLSPLLLAATTAPTTTATTLLAATLAGALLAAAAAATTDAASPPKSRSARLP
WLAGGFLMSVLWSYVLARELVALLVSIGVAAGVEAGVLGATVLAWGNSLGDLVADVALAT
RRGDGGAGAQTAVAGCYAAPAFNTVVGLGLSLTVAAGARHPEAYAVEGGAAVYVAVGFLA
AALVWAVAVLPARGMRLDAVLGVGLLVIYFVFLCVSLAILTPLPSPH
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcttgcgaacgctgcaccggcgaagaacgcgcaatgccgccgccgccgcg
ttcttggctctcgccgtcgtcgtcgtcgtcttcttcttgtccgtgttcgtcgccacgcgg
aatgaggctgacatcttcttcagtggcgtcgcggcggcgagctcgtcgtcgccggattcc
tcgtccggtgggtgcagggagctgcaggcgctcgacggcgatggcgcgaggtgccggtat
ctgcgggcgcacgcgccgtgcgcgccggtggggtacgtggactacctccggctgctgtac
tgcgggttcgggcgggcgccatggctgggctacgcggcgctcgcgctgtggctgctcgtg
ctcttctacctcctcggcgacacggcgtcggcctacttctgcgcctcgctggaggggctc
tccgccgtgctccgcctgccgccggcgatcgccggcgtcacgctgctgtcgctcgggaac
ggcgcgcccgacgtgctctctagcgtcgtggcgttcgccgcgggggcacgcggcggcgac
ggcggcggcggcggaggggaggatgccggggatgttggcctcagcggcgtgctcggtggc
gcgctgttcgtgtccaccgtcgtcgccggcgtggtcgctatcgtcgccgggcgtcgcggt
ggtggcgagccggtgatcatcgagcggcgcgggttcgtgcgcgacgtgtgcttcctcctc
gtggcgctctgctacctcctcgccgtgctgctcaccggcgccgtcaccgtctggtccgcc
gcgtcgttcctctccctctacgccggctacgtcctcctcgtctggacctcgcactgctgc
gccaacgcctccgacgaactcgaagtggacgacaccaagcagcccacctccgacctcgcc
gcgccgctcctcgtcgtcgacgacgacgacgcgtcaccgcctccactccccgtctcctcc
tcctccaagcccacctccgcgccgagaacgttcgcgcgccgcctcgtcgacctcctccac
tcgccgctctacctcccgcgacgcctcaccatcccggacatcgcggcgcaccggtggtcg
aagcccaccgcggtggccaccgcgctcctctccccgctcctcctcgccgccaccaccgcg
cccaccaccacagcgaccaccctcctcgccgccacgctcgcgggcgccctcctcgccgcc
gccgcggcggccaccacggacgccgcgtccccgcccaagagccgctcggcccgcctcccg
tggctcgccggcgggttcctgatgtcggtgctctggtcgtacgtgctcgcgcgggagctc
gtcgcgctgctggtctccatcggcgtggcggccggcgtggaggccggcgtgctgggcgcg
acggtgctggcgtgggggaactcgctgggcgacctggtggcggacgtggcgctggcgacg
cggcgcggcgacggcggcgccggggcgcagacggcggtggcggggtgctacgcggcgccg
gcgttcaacacggtggtggggctggggctgtcgctgacggtggcggccggggcgcggcac
ccggaggcgtacgcggtggagggcggggcggcggtgtacgtggcggtggggttcctggcg
gcggcgctggtgtgggcggtggcggtgctgccggcgagggggatgaggctggacgcggtg
ctcggggtgggcctcctcgtcatctacttcgtcttcctctgcgtcagcctcgccattctc
acgccattgccttcaccacattaa
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