Oryza sativa japonica (Japanese rice) (RAPDB): Os12g0641500
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Entry
Os12g0641500 CDS
T02163
Name
(GenBank) SMC protein, N-terminal domain containing protein
KO
K06636
structural maintenance of chromosome 1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os12g0641500
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
Os12g0641500
Meiosis-specific proteins
Cohesin complex and associated proteins
Os12g0641500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
LemA
SMC_hinge
AAA_21
SepSecS
APG6_N
DUF1664
ABC_tran
DUF3450
FUSC
Motif
Other DBs
NCBI-ProteinID:
BAF30423
RAP-DB:
Os12g0641500
UniProt:
Q0ILJ2
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Position
12
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AA seq
632 aa
AA seq
DB search
YYTFDRALEKAVLYAVGNTLVCDELDEAKTLSWSGERYKVVTVDGILLTKSGTMTGGISG
GMAARSNKWDDSIIESWKKKKNQYESEMSELGSPRELQRKELAVSEKITGLEKKLHYLNV
EENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREVRVLEKKINEIVDRIYK
DFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQAPIIKLKE
TRESLEKELKSLQERESEARAEAEQISNQMEELKAEAELQLYSPIFHLKSTSLLRFFHWK
SKSDECETGIDELKEKNGSVAAALAKLDRQVKSKEGKLVQLRSQEREIHEKCELEQLKLP
TVNDPMDTGSSSQIPILDYSQLSENYLQDMRLSERDKLEAEFKKKIGDLVAQIEHTAPNL
KALDQYETLQRKEKDVMEKFEAARKEELEIADKYNSVKQRRYELFMEAFDHISKGIDQIY
KELTKSQTHLLGGTAYLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALL
FAIHRPSPFFILDEVDAALDNLNVAKVAGFIRSKSCQRVDEQDNGGCGFQSIVISLKDSF
YDKAEALVGVYRDSERCCSRTLTFDLTKYREA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
tattatacatttgaccgtgctttggagaaagcggttctgtatgctgttggaaatacgctt
gtctgtgatgaacttgatgaagcgaaaaccttaagttggagtggtgaaaggtacaaggtt
gttaccgtcgatgggattcttctgactaaatcgggcacgatgactggtggaataagcggt
ggaatggcagctagatctaataaatgggatgacagcataatagaatcttggaagaagaag
aaaaatcagtatgaatctgaaatgtcagaacttggatcccccagggagttacagagaaag
gagcttgctgtgtctgagaaaataactggacttgagaaaaagttacattacttgaatgtt
gaagagaataatctcagggagaagctacgcagattggaatctgagaagagtaatatagag
gaagagatcgatcgtcttgagccagtaaaggaggagttggagacccgtattggtaaaaag
gaacgggaagtgagagttcttgagaaaaaaataaatgagattgtggaccgtatttacaaa
gattttagcaagtcagttggggtgaagaacatccgtgaatatgaagagaggcaacttaaa
gatgctcaagcactacaggagaggaagctaagcctgagtaatcaaatgtcaaaattgaaa
taccagctggaatatgaacaaaaacgagatatgcaggcaccaattattaaattaaaggag
acacgtgaatctctagagaaggaacttaagagtttacaggagagagagtctgaagctagg
gcggaagctgaacaaatttcaaatcagatggaagagctgaaagctgaggctgaattgcaa
ctctattccccaatcttccatctaaagagcacttctcttttgcgattcttccactggaaa
tccaagtctgatgaatgtgaaacgggtattgatgaactgaaggagaagaatggtagtgtt
gctgcagctttggcaaagctggatcgccaagtgaagtcaaaggaagggaagcttgtgcaa
cttagatcacaggaacgggagattcatgagaagtgtgaactggagcaactgaagcttcct
acagttaatgatccaatggatactggatcatcttcacaaataccaatccttgactacagt
cagcttagcgaaaactacctacaagatatgcggctttctgaacgtgacaaacttgaggca
gagttcaaaaaaaaaataggggatctagttgctcagattgagcacactgctccaaacctg
aaagcgctcgaccaatatgaaacattgcaaaggaaggaaaaggatgttatggaaaagttt
gaagcagcaagaaaagaagagctggagatagctgacaagtacaattctgtcaagcaacga
aggtatgagctgttcatggaagcctttgatcacatatcaaaaggcatagaccaaatctat
aaggagttaacaaaaagtcaaacacatctacttggaggaacagcatatttaaatctagaa
aatgaagatgagccatttttacatggaatcaagtacacagctatgcctccgacaaagcgc
tttagagatatggaacagttatctggtggtgagaagactgtcgctgccctggcattgctt
tttgccattcacaggccatccccattcttcatattggatgaagttgatgctgctctggat
aatttaaatgttgccaaggttgctgggtttatcagatcaaagtcatgccagcgcgttgat
gaacaagataatggaggatgtggatttcagagcatcgttatatcgctgaaggacagtttc
tatgacaaagctgaagcgctggttggtgtttatagggactcagaacgatgttgctcgaga
accctaaccttcgacctgacgaagtatagagaagcatga
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