Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0138050-00
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Entry
Os12t0138050-00 CDS
T02163
Symbol
Os12g0138050
Name
(RAP-DB) Similar to EF hand family protein, expressed.
KO
K13448
calcium-binding protein CML
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
Os12t0138050-00 (Os12g0138050)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_7
EF-hand_8
AIF-1
EF-hand_9
Motif
Other DBs
RAP-DB:
Os12t0138050-00
LinkDB
All DBs
Position
chr12:join(1851425..1852008,1854807..1854939)
AA seq
238 aa
AA seq
DB search
MMKLAHLFGSSSSSSSSKKENKVSSKKRRSGAKSCSFGSTTSSSSLAASSSDDSAATTPR
SVLPTSAAASSSGTKKPAAAAVTREDLEVALRRIVSSKEELAAMLAEADYAGELVLEEIA
AAAADEGELKETFAVFDADGDGRISAEELRAVLASLGDELCSVDDCRRMIGGVDTDGDGF
VCFDEFARMMMCGRAASAKTAARRWSACGASRDASCVMCSRQRLARSKEPADTSAAHW
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcttgcgcatttgttcggctcttcttcttcgtcttcctcctccaagaaggag
aacaaggtgagcagcaagaagaggaggagcggcgccaagagctgctccttcggctccacc
acgtcctcgtcgtcgttggcggcgtcatcatccgatgattccgccgccaccacgccgaga
tccgtgttgccgacgtcggcggcggcgtcctcctccggcaccaagaagccggcggcggcg
gccgtgacgcgggaggacctggaggtggccctgcggaggatcgtgtcgagcaaggaggag
ctggccgcgatgctcgccgaggcggattacgccggggagctcgtgctggaggagatcgcg
gccgcagcggcggacgagggcgagctgaaggagacgttcgcggtgttcgacgccgacggg
gacgggaggatctccgccgaggagctccgcgccgtgctcgcctcgctcggcgacgagctc
tgctccgtcgacgactgccgccgcatgatcggcggcgtggacaccgacggcgacgggttc
gtctgcttcgacgagttcgcccgcatgatgatgtgtggccgcgccgcgtcggcgaagacg
gcggcgaggcgctggagcgcgtgcggcgcgtccagggacgcgagctgcgtgatgtgctcg
aggcagaggttggcgcggtcgaaggagccggcggacacctcggcggcgcactggtaa
DBGET
integrated database retrieval system
