Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0211400-00
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Entry
Os12t0211400-00 CDS
T02163
Symbol
Os12g0211400
Name
(RAP-DB) A/G-specific adenine glycosylase MutY, bacterial form domain containing protein.
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os12t0211400-00 (Os12g0211400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os12t0211400-00 (Os12g0211400)
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Os12t0211400-00 (Os12g0211400)
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os12t0211400-00 (Os12g0211400)
Prokaryotic type
Os12t0211400-00 (Os12g0211400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Whib
Motif
Other DBs
RAP-DB:
Os12t0211400-00
LinkDB
All DBs
Position
chr12:join(5849759..5850163,5850283..5850342,5850804..5850920,5851014..5851111,5851471..5852021,5852119..5852222,5852299..5852388)
AA seq
474 aa
AA seq
DB search
MAKNPKAAKNRRPTTRRPRAAAATATATASASADIEDLASPSGCRAVAGPTTAAAAVRAE
LLRWYDANRRDLPWRRAAEPPAGSGSGRGEEQRAYAVWVSEVMLQQTRVPVVVDYYSRWM
ARWPTVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPCTASTLREVRGIG
DYTAGAIASIAFNEVVPVVDGNVVRVISRFYAIPDNPKESSTVKRFWQLTGELVDPSRPG
DFNQAMMELGATLCSKTKPGCSQCPVSSHCQALALSSQNASVKVTDFPRVVPKAKPRSDF
AAVCVVQISQGFGEGIAEAEGKDNLFLLIKRPEEGLLAGLWEFPSVLVNEGKTDTLNRRK
EMDKYLKQLLSIDVTRRSSVILREDVGQHVHIFSHIRLTMFVELMILNLKDDGEELCKEG
QDSTKLRLINENAVQSMGLTSGIRKVYNMVKVFKEKRLKEQSQVPTRKRSRRLK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaccccaaggcggccaagaaccgccgccccacgacgcggcgacctcgcgcc
gccgccgccaccgccaccgccaccgcctccgcctccgcggacatcgaggacctggcgtcg
ccgtccgggtgcagggcggtagcggggcccaccacggccgccgcggcggtgcgcgcggag
ctgctgcggtggtacgacgcaaaccggcgcgacctgccatggcggcgcgccgcggagccg
ccggcggggagcgggagcgggcgcggcgaggagcagagggcgtacgcggtgtgggtgtcg
gaggtgatgctgcagcagacgcgggtacccgtggtggtcgactactactcccggtggatg
gcccgctggcccaccgtggacagcctcgccgccgccacgcaggaggaggtgaacgagatg
tgggcggggctcgggtattaccggagggctcgatttctgctcgagggagcaaaacaaatt
gttgaaaaaggcgagttcccttgcacagcatcaacactccgtgaagttcgtggcattggg
gattacacagcaggagccattgcttccatagccttcaatgaggttgtccctgttgtggac
ggaaatgttgttcgagttattagcaggttttatgctattcctgataacccaaaggagtcc
tcaacggtgaagagattctggcagctcactggtgaactggttgacccttcaaggccagga
gacttcaaccaagcaatgatggaactaggagcaacactctgcagcaagacgaagcctggt
tgctctcagtgccctgtctctagccactgccaagcgctcgcactttccagccaaaatgct
tcagtcaaagttacagacttcccacgagtagtcccaaaagccaaaccacggtctgatttt
gctgctgtctgtgttgttcaaatttcacaaggctttggtgaaggtatagcagaggcagag
ggcaaagataatctttttctactgatcaagaggccagaagagggccttctcgctgggctc
tgggagttcccatctgttcttgtgaacgaagggaagactgatacgctgaataggagaaaa
gagatggacaaatatttgaagcagcttcttagcatagatgttacaaggagatccagtgtg
atcctcagggaagatgttggccaacatgttcacattttctcacacattcggctgacgatg
tttgttgagctgatgattttgaacctcaaagatgatggggaggaattatgcaaggaggga
caagatagcaccaaactgagattgattaacgaaaatgcagtccagtcgatgggattgaca
tcaggaatccggaaggtgtacaacatggtcaaggtcttcaaggagaaaaggctgaaagag
cagagccaagtgccgacgaggaaaaggagtagacggctgaaataa
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