Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0618600-01
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Entry
Os12t0618600-01 CDS
T02163
Symbol
Os12g0618600
Name
(RAP-DB) Similar to Transcriptional activator HAP2.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os12t0618600-01 (Os12g0618600)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os12t0618600-01 (Os12g0618600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
RAP-DB:
Os12t0618600-01
LinkDB
All DBs
Position
chr12:complement(join(26350203..26350440,26348981..26349081,26348789..26348857,26348105..26348248,26347469..26347852))
AA seq
311 aa
AA seq
DB search
MMSFNKSQEGFGQVAAVATLASNGGGSLPWLLYGEPLGQGKPAMSPEGVVPRAQTPLDPP
QVPAMDRGVPEILNFSMVPGKGEKCSEHSTTIALQSPFAEYNGCFELGLGQSVVPSNYPY
ADQHYGLLSPYGVRPTPSGRILIPPNMPADAPIYVNAKQCSAIIRRRHARAKAERENRLV
KARKPYLHESRHLHAMRRARGSGGRFLNTKKETNGKTTGGGRKVMDIIIPPLCPAASPSS
EQCNPSSVSSLSGSEVSSIYEHEDMDHFHSFDHLRTHFFTPLPSLMDVEHGAGNPFKWTA
ASDGCCDLLKA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttcaacaagagccaagaaggatttgggcaggttgctgctgtggccaccctg
gcctccaatggaggaggctctctaccatggctgctgtacggcgagccactggggcagggg
aagccggccatgtcgccggagggcgtggtgccgagagcacagactcctctggatcctcct
caggttccagccatggacaggggtgtccctgaaattctgaacttctccatggttccaggt
aaaggagaaaaatgttctgagcactcaactactattgctctgcagtcaccatttgcagaa
tataatggctgttttgagctgggccttggtcaatctgtggttccctctaattatccttat
gctgaccagcactatggcctactttctccttatggagtgagaccaacgcctagcgggcga
attcttattccaccaaatatgccagctgatgcaccaatttatgtgaatgcaaaacagtgt
tcagccatcattcgacgtcgccatgctcgtgccaaggcagagagggagaataggctggtc
aaagctagaaaaccatatcttcacgaatcacgccatcttcatgcaatgcgtcgtgcaaga
ggctctggtgggcgcttcctcaacacgaagaaagagaccaatgggaaaaccactggtgga
ggcaggaaggtgatggacatcatcatcccgcctctgtgccccgccgcatctcccagctcg
gagcagtgcaacccaagcagcgtttccagcctgtccgggtcagaggtgtcgagcatatat
gaacacgaagacatggaccacttccatagctttgatcatctccggacacacttcttcacc
ccgctcccgagcctcatggatgtcgagcacggggctggtaaccccttcaagtggacagca
gcctctgatggctgctgtgacctcctcaaagcatga
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