Oryza sativa japonica (Japanese rice) (RAPDB): rpoA
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Entry
rpoA CDS
T02163
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
rpoA
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
rpoA
03400 DNA repair and recombination proteins [BR:
dosa03400
]
rpoA
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
rpoA
Transcription machinery [BR:
dosa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
rpoA
DNA repair and recombination proteins [BR:
dosa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
rpoA
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
CAA33979
UniProt:
P0C500
E9KIR2
LinkDB
All DBs
Position
CP
Genome browser
AA seq
337 aa
AA seq
DB search
MVREEVAGSTQTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGETEGT
CITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQD
IILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVR
NVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQ
ENKNRFTSPLLSFQKRLTNLKKNKKRIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLS
KTEEDLMRIDSFRMQDGKQIWDTLEKHLPMDLPKNKF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaggaggtagcaggatccactcaaacactacagtggaagtgtgttgaatca
agagtagatagtaagcgtctttattatggtcgtttcattctgtccccgcttagaaaaggt
caagcggataccgttggtattgccttgcgaagagctttacttggagaaacagaaggaaca
tgtatcacacatgcaaaatttgggagcgtgccgcacgaatattctacaatagcaggtatt
gaagaatcggtacaagaaattttactaaatttgaaagaaattgtattgagaagtaatctc
tatggagttagaaccgcatcaatttgcgtcaaaggtcctagatacataactgcccaagat
attatcttaccgccttccgtagaaatcgttgatacggcacaacctatagctaacttgaca
gaacccacggatttccgtattgagttacggatcaagagagatcgcggatatcacacggaa
gtcagaaagaacactcaagatggaagttatcctatagatgctgtatccatgcctgttcga
aatgtgaattatagtatttttgcttgtgggaatggaaatgcaaaatatgagatacttttt
ctagaaatatggaccaatggaagtttaacccctaaggaagcgctttatgaggcttctcgt
aatttgattgatttatttcttccttttcttcacacggaggaagagggtactcgtttccaa
gaaaataaaaacaggtttacttccccccttttaagctttcaaaaaagattaactaatcta
aagaaaaacaaaaaaagaattccattgaattgtatttttattgatcaattagaactgcct
tctagaacgtataattgtctcaaaagggccaatatccatacactattggaccttttgagt
aagacggaagaagatctgatgagaattgacagttttcgtatgcaagatggaaaacagata
tgggacactctagagaagcatctcccaatggatttacctaagaataagttctag
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