KEGG   Dolichospermum sp. DET69: EZY12_00055
Entry
EZY12_00055       CDS       T10135                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dot  Dolichospermum sp. DET69
Pathway
dot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EZY12_00055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dot03019]
    EZY12_00055
Messenger RNA biogenesis [BR:dot03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EZY12_00055
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL RNase_J_C Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QSX68160
LinkDB
Position
complement(11209..12975)
AA seq 588 aa
MVKNEANSALKIIPLGGLHEIGKNTCVFEYEDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENKHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIHGPRLAMAMLEGKLEEAGVRDRTE
LRTVLPRDMVRIGKHFFAEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGEKF
DLQRLAEHGEKGVLCLLSDSTNAELPGFTPSERSVFPNLDREFSHATGRLFVTTFSSSVH
RINMILQLARKHNRVVTIVGRSMLNLIAHARNLGYIKCEDSLFQPLHTVRGMPDERVLIL
TTGSQGERMAAMTRIANKEHPHIKIRKGDTVLFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEDQKLMIALTRPKFFVPFHGEHRMLVKHSETAQSMGIPAENMIII
QNGDVIELTETSIRVAGKVASGIELVDTSSSGMVSSKVLEERQRMASEGTVTIAAAIDWS
GKLMAKPELHMQGVVTSIERSLLQKWVQQRIEEILGVRWTEFSPLEGQPADTDWGGLQET
LERELARSMRRELQCQPALTLLMQIPEEPAVKVSDGRRRRTRSTAVAS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggttaaaaacgaagctaattccgctctcaaaattatccctttaggcggcttacacgaa
ataggtaaaaatacttgtgttttcgagtatgaggacgaaattatcctcttagatgcagga
ttagcctttcctacagaagcaatgcacggggtaaatattgtattacctgatacgacttat
ctgcgggaaaataagcacaaaatcaaaggcatgatcgtcactcatggtcacgaagatcat
attggtgggattgcttttcacttgaagcaatttgatattccggtgattcatggaccaaga
ctagcaatggcgatgctagagggtaaattggaagaagcaggagtaagagatcgcacagaa
ttaagaacagttctcccccgtgatatggtgagaattggtaaacatttctttgccgaatat
atccgcaatacccactctattgctgatagtttcactgttgctattcatacaccactaggc
gtagttatccacaccggagattttaaaattgatcatactcccgtggatggtgaaaagttt
gacttgcaacgtttagcagaacatggcgaaaaaggcgtactttgcttattgagtgattcc
actaacgcagaattgccaggatttacaccttccgaacggtctgtttttcccaaccttgac
cgagaattttctcacgctactggacgcttatttgtcacaaccttttcttccagcgtccat
cgcattaacatgattttgcaactagcaagaaaacataatcgtgttgtgacgattgtaggg
cgttccatgttgaatttaatcgcccatgcccgaaatttaggctatatcaagtgtgaagat
agccttttccaaccgttgcatactgttcggggaatgccagatgagagagtgttgatttta
accactggctctcagggtgaaagaatggcagcaatgacaagaattgccaacaaagaacac
ccccatatcaaaattcgcaaaggagatacggttctattctccgctaaccccattcctggt
aacacaattgcagtggttaataccattgataaattgatgattcaaggggcaaaagtggtc
tatggacgagataaagggattcacgtttctggacatggctgtcaggaagatcaaaagctg
atgattgccttaactcgtcctaagttctttgtgccatttcacggtgaacatcggatgtta
gtcaaacattcggaaactgctcaaagtatgggcatcccagcggaaaatatgatcattatc
caaaatggggatgtcatagagttgacagaaacttctatccgcgtggctgggaaagtggca
tctggaattgaattggtggatacttctagttctggcatggttagttctaaggtattagaa
gaacgccaacgcatggcttctgaaggaactgtaactattgctgctgctattgattggagt
ggtaagttaatggctaaaccagaacttcatatgcaaggtgtggtgacaagtatcgagcga
tcgctcttgcaaaaatgggtacaacaacgcattgaagaaattctcggcgttcgttggact
gagttttctcccctcgaaggacagccagcagatacagattggggtggattgcaggaaact
ttagagcgggagttggcgcgttcaatgcggagagagttgcaatgtcaacctgctttgact
ctgttaatgcaaatccctgaagaacctgctgtgaaggtttctgatgggagaagacgacgc
actcgttctactgctgtagcttcttaa

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