Dolichospermum sp. DET69: EZY12_16550
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Entry
EZY12_16550 CDS
T10135
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dot Dolichospermum sp. DET69
Pathway
dot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EZY12_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dot03019
]
EZY12_16550
03400 DNA repair and recombination proteins [BR:
dot03400
]
EZY12_16550
Enzymes [BR:
dot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EZY12_16550
Messenger RNA biogenesis [BR:
dot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EZY12_16550
DNA repair and recombination proteins [BR:
dot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EZY12_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSX66420
LinkDB
All DBs
Position
complement(3634336..3635781)
Genome browser
AA seq
481 aa
AA seq
DB search
MNLPVTQSWHDVRAALKAIWGYDDFRPPQKEIVNCLISQEDALIIMPTGGGKSICFQLPA
LLQTGLTLIVSPLVALMENQVEELRQLSQKAALLHSELTPFQRQATLQALEKQQLRLLYL
SPETLLSPAVWKRLCDPQLQINGLILDEAHCLVQWGDSFRPAYRRLGAVREALLKSKPPG
TKISIAAFTATADPLAQKIISTVLKLHKPEIFRINPYRENLNPLVRIAWTPKGRKQQLLK
FIQERPNQVGLIYVRTRRDSENLAQWLTEIGHQTNSYHAGLSPEERRNIEANWLSGKVQF
VVCTCAFGLGINKPDVRWVIHFHAPHLLSEYVQEIGRAGRDGKPADVLTLVSEPTGLLDS
EDKQRQHFFAEQMRGQQQKAQQLATKLPPQGEVNAVIKEFPIAAVALSLLHSNGQLEWLD
PFHYAISSKSGNPPETQLQSAKQMSEYLTTKKCRWQFLLNAFGFETPTANWRCGHCDNCG
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcccagtaacacaatcttggcacgatgttcgcgcagcattaaaagcaatttgg
ggatatgacgattttcgtcctcctcaaaaagaaattgttaactgtttaatatcacaagaa
gatgccctaattattatgcccacaggtggggggaagtcaatttgttttcaacttcctgcc
ctactacaaacaggattgactttaatagtttctcctttggtggcactaatggaaaaccaa
gttgaggaattacgtcaactatcacaaaaagctgcacttttacacagtgaattaactcca
tttcaacgccaagcaactttgcaagctttggaaaaacagcaattaagattattatattta
tcaccagaaactttactaagtccagcagtgtggaaaaggttatgtgatccccaactacaa
attaatggtttgattctggatgaagcccattgtttagtgcagtggggtgatagttttcgt
ccagcttatcggcgattgggggctgtgcgtgaagcgttactaaaatcaaaaccaccagga
acaaaaattagtatagcagcttttacggcaacggctgatcctttagcccaaaagattatt
tctacagttttaaaattacacaaacctgagatttttcggattaatccctaccgggaaaat
ttaaatcctcttgtccgcattgcttggactcctaaagggagaaaacaacaattattaaag
tttattcaagaacgaccaaatcaagttggtttaatttatgtacggactcgaagagatagt
gaaaatttagctcagtggttgacagaaataggacatcaaactaatagttatcatgctgga
ttgagtccagaagaacgtcggaatattgaagctaattggttgagtggaaaagtccagttt
gtggtatgtacttgtgcttttggactgggaataaataaaccagatgtccgctgggttatc
cattttcatgcaccacatttattatctgaatatgtgcaagaaataggacgagcaggaaga
gatggtaaacctgctgatgtgctaactttggtaagtgaaccaacggggttattagattct
gaggataagcaaagacagcatttctttgcagaacaaatgagaggacaacagcaaaaagcc
caacaattagccacaaaattaccaccccagggggaagtaaatgctgtaattaaagaattt
cccattgctgctgtggcactttctcttctccatagtaatggacaactagaatggcttgat
cctttccattatgctatttcttcaaagtcaggaaatccaccagaaacgcaattacaatct
gctaaacaaatgagtgaatatctcactactaaaaagtgtcgttggcagtttttattaaat
gcctttgggtttgaaacacctactgctaattggcgttgtggacattgtgataattgcggc
aagtaa
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