Dolichospermum sp. DET69: EZY12_21930
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Entry
EZY12_21930 CDS
T10135
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dot Dolichospermum sp. DET69
Brite
KEGG Orthology (KO) [BR:
dot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EZY12_21930 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dot03021
]
EZY12_21930 (rpoD)
Transcription machinery [BR:
dot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EZY12_21930 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QSX67344
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Position
4792978..4794153
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AA seq
391 aa
AA seq
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MNQANNVLENIYQPDLEMINPPEIELQALLIEEEEDLLLTDDGEIDDFLEPQSDEDDAKS
GKAAKSRRRTTTTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAELLELERARER
LCERLERNPRDSEWAAEVSLPLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLS
FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI
SRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG
DFIESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFN
VTRERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctaacaacgtactcgaaaatatttatcagcctgacctagaaatgataaat
ccgcctgagatcgaattacaagcactcttaatagaagaagaagaggacttactgctgact
gatgacggcgaaattgatgattttttagagcctcagtctgatgaggacgacgcaaagtct
ggaaaagccgctaaatcgcgtcgtcggacaacaactaccaagaaaaagcactacaccgaa
gattcaattcgtttgtacttgcaagaaattgggcggattcgtttgttacgcgcagacgaa
gaaattgaactagcgcggaaaattgctgaattactggaactagaacgagcgcgggaaagg
ctttgtgaacgcctagaacgcaatcctagagacagtgaatgggccgcagaagtatcatta
ccattaccaacctttcgttatcgcctccacgttggccgccgagcgaaagacaaaatggta
caatctaacctacggcttgtagtttccattgccaaaaaatacatgaatcgaggcttgtcc
ttccaagacttgattcaagaaggtagtttgggtttgattcgtgcggctgaaaagtttgat
cacgaaaaaggctataagttttctacctacgctacatggtggatacgtcaagcaattact
agagcgatcgctgatcagtcccggactatccgtctacctgttcatctttacgaaaccata
tcacggattaagaaaaccaccaaactcctatcccaagaaatgggacgcaagcccacagaa
gaagaaattgccactcgcatggaaatgaccatcgagaaactgcggtttattgctaaatca
gcccagttaccaatttccttagaaacacctatcggtaaagaagaagactcccgtttaggc
gattttattgaatctgatggtgaaaccccagaagatcaagtttctaagaacttgctgcgg
gaagacctagaaaaagtcctcgatagtctcagcccccgtgaaagagacgttctccgactg
cgctatggtttagatgatggtcgcatgaaaactctggaagaaatcggccagatttttaac
gtcacccgcgaacggattcgccaaatcgaagccaaagcactccgtaaattacgccacccc
aaccgtaacagcgtattgaaagagtatatccgttag
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