Dolichospermum sp. DET69: EZY12_22975
Help
Entry
EZY12_22975 CDS
T10135
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dot Dolichospermum sp. DET69
Pathway
dot00521
Streptomycin biosynthesis
dot00523
Polyketide sugar unit biosynthesis
dot00525
Acarbose and validamycin biosynthesis
dot00541
Biosynthesis of various nucleotide sugars
dot01055
Biosynthesis of vancomycin group antibiotics
dot01100
Metabolic pathways
dot01110
Biosynthesis of secondary metabolites
dot01250
Biosynthesis of nucleotide sugars
Module
dot_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EZY12_22975 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EZY12_22975 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EZY12_22975 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EZY12_22975 (rfbB)
00525 Acarbose and validamycin biosynthesis
EZY12_22975 (rfbB)
Enzymes [BR:
dot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EZY12_22975 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
KR
Motif
Other DBs
NCBI-ProteinID:
QSX67519
LinkDB
All DBs
Position
complement(5012097..5013119)
Genome browser
AA seq
340 aa
AA seq
DB search
MNRRLLVTGGAGFIGANFVHHWCQSYPNDRLVVLDALTYAGNLHNLASVAEKENFRFVQG
DISDRSLVDKLLLEENIDTIAHFAAESHVDRSITGPAAFVQTNVVGTFTLLEAFRQHWQA
NTQPSNYLFLHVSTDEVYGSLTSDEPAFSETTAYSPNSPYSASKAGSDHLVRAYYHTYKL
PTIITNCSNNYGAFQFPEKLIPLMCIHILTGKELPIYGDGKNVRDWLYVVDHCRALDVVI
HQGKPGENYNIGGNNEVENISLVQNLCEIMNELAPNLPVYPAEKLITFVQDRPGHDRRYA
INANKLKTEFGWTPSVTITEGLRLTVEWYLSHPDWWKPLL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacgattattggttacagggggtgctgggtttattggtgcaaattttgtccat
cattggtgtcaatcttatccaaatgatagactagtcgtgttggatgctcttacctacgct
ggaaatctccataatttagcctcggttgccgaaaaagagaatttccgatttgtgcaagga
gacataagcgatcgctctttagttgataaactactgttagaagaaaatatagatactata
gcccattttgctgccgagtctcacgttgatcgttcaattactggacctgctgcatttgtt
caaactaatgtggtgggaacttttacccttttagaagcttttcgtcaacattggcaagca
aatacacaacctagtaattacctatttcttcatgtttctacagatgaagtttatggtagt
ctcacttcagatgaaccagcattttcagaaactacagcctatagtcccaatagtccttat
tcagcctcaaaagctgggagtgatcatttagttcgggcttattatcatacttataaatta
ccgacaattatcacaaattgctctaacaattatggcgcttttcaatttccagaaaagctc
attcctctaatgtgtattcatattttgacaggtaaagaattacctatttatggtgatggt
aaaaatgttcgagattggttatatgtagttgatcactgtcgggctttagatgtggtaatc
catcaaggaaaaccaggagaaaattataacattggtggtaataacgaagttgaaaatatc
agcctggtacaaaatttatgtgaaattatgaatgagttagcaccaaatttaccagtatat
ccagcggaaaaattaattacttttgttcaggatagacctggacatgatcgaagatatgca
attaatgccaataagctaaaaacagaatttggttggactccatcggtgacaattactgaa
ggtttacgtttaactgtagaatggtatctcagtcatcctgattggtggaaacctttgcta
taa
DBGET
integrated database retrieval system