Dolichospermum sp. DET69: EZY12_26455
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Entry
EZY12_26455 CDS
T10135
Name
(GenBank) DNA-directed RNA polymerase subunit beta''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dot Dolichospermum sp. DET69
Pathway
dot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EZY12_26455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dot03021
]
EZY12_26455
03400 DNA repair and recombination proteins [BR:
dot03400
]
EZY12_26455
Enzymes [BR:
dot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EZY12_26455
Transcription machinery [BR:
dot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EZY12_26455
DNA repair and recombination proteins [BR:
dot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EZY12_26455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QSX70846
LinkDB
All DBs
Position
complement(5770365..5774483)
Genome browser
AA seq
1372 aa
AA seq
DB search
MTKAVFRNLVVNKSKLRDLISWSFTHYGTARTAVMADKLKELGFRYATKAGVSISVDDLM
IPPSKKELLEAAETEILVTEEKYQRGEITEVERFQKVIDTWNSTSEALKDEVVVHFQKTD
PLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISSY
GARKGLVDTALRTADSGYLTRRLVDVSQDVIVREFDCGTNKGLTIGAMVEGSKILIKLAT
RLMGRVVGEDVVHPVTGEMIAPRNTPIDDDLAIAIQKSGVQTVTVRSPLTCEAARSVCQH
CYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKVSGTV
KIPRKLQTRPYRTRHGEDALYVEANGTLMVEGDKKQGTGESQEIAVTQGSTLYIHNGQQV
LADHLVAEVALGGRTTRTNTEKAVKDVLTGLAGEVKFADVVAEQKTDRQGNTTVTASRGG
LIWILSGDVYNLLPGAELMVKNGDAIDTNGVLAETKLTTVHGGVVRLPEAIPGKATREIE
IITASVVLDQAEISVHSSQGRNNYLITTTNPTNGSVSEFNLRATPGTKVQNGQVVAELID
DQYRTTSGGLLKFAEVEVQKKGKAKLGYEVVQGGTLLWIPEETHEVNKDISLLLVEDGQL
VEAGTEVVKDIFCHTGGVVEVTQKNDILREVVIKPGELLMVDDPETAIAHDNTFLQPGEE
LQGMVATELRYIQYVETPEGPGLLSRPVVEFAVPTHPDVPATTSVSQHTGRSIQLRAVQR
IPYKDSERVKSVEGVELLRTQIVLEIEQETEGEHGASPLAADIELITDSENAEIQRLQLV
ILESLVVRRDITADATQGSTQTNLEVVDGDTIDPGSVVARTKILCKEGGIVRGVQQGSET
VRRCLVLRPNDLITVNTNVLPNLKTGDLVVEGSTIATGIVAAESGQVVSVVSGQLSAAST
KTMDNGQLTTDKLSHTITLRIGRPYRVSPGAVLQVEDGDLVQRGDNLVLLVFERAKTGDI
IQGLPRIEELLEARKPKEACILARRPGEVKVVYGDGDEITSITREAYSIKIVEANGTVTD
YPLGPGQNLIVPDGAHIVAGQPLTDGPSNPHEILEIFFSLGSEDGIYACASHALQKVQTF
LVNEVQMVYQSQGIEISDKHIEVIVRQMTNKVRIDDGGDTTMLPGELVELRQVEQVNEAM
SITGGARAEYTPMLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVI
IGRLIPAGTGYNTYEEVGVIDDYVTDMGIGVLDEVDDPLDMVLDDRTAKLYNLDAPGIVE
GGFGSKIGERLILDDDDDLIADEISDLVIEEDDDFEEEEEDDDNDDDDFDDE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagtttttcgcaatcttgtggtaaataagagtaaattgagagatttaatt
tcttggtcatttacccattatggaacagcgcggacagcggtaatggcagataaactcaaa
gaattgggtttccgctatgctaccaaagccggggtatctatcagcgtagatgacttgatg
attcccccttccaaaaaagaacttctagaagcggcagagacagaaattctcgtcacagaa
gaaaaatatcaacggggggaaattactgaagtggaacgtttccaaaaagtaattgatact
tggaacagtacctccgaggcgttgaaggatgaggtagtagttcacttccaaaaaacagat
cccctcaactccgtctatatgatggcgttctcaggagcgcggggaaatatttcccaggtg
cggcagttggtaggaatgcggggactaatggcagatccccagggggaaattattgattta
ccgattaaaactaatttccgagaagggttgacggttacagaatatattatttctagttat
ggagcgcggaaagggctggtagatacagcactgcggacagcggactctgggtatttaacc
cgacggttggtggatgtttcccaagatgtgattgtgcgggagtttgactgtggcactaac
aaagggctaactatcggggcgatggtggaagggagcaagatcttaattaaactggcaacc
cggttaatgggcagagtcgtgggtgaggatgtggtgcatccagtcacaggagaaatgatt
gccccccggaataccccgattgatgatgatttggcgatcgcaattcaaaaatctggtgtt
caaaccgttacagtccgcagtcccttgacctgtgaagctgcccgttccgtgtgtcaacat
tgctatggctggagtttggcccacgcgaagatggtggacttgggagaagctgtggggatt
attgccgctcagagtattggtgaaccaggaacccagttgaccatgcggacattccacacc
gggggcgtatttacgggggaagtagcgcaacaggtgcgttctaaggtgtcaggaacagtg
aagattccccgcaaactacaaacccgtccctatcgaacacgccatggtgaagacgcgctg
tatgtggaagccaacggcacattgatggttgagggtgataaaaagcaggggacaggggaa
agtcaagaaattgccgttacccaaggttcaaccctgtatattcacaatggtcagcaggta
ttggcagatcacttagtggcagaggtagcactggggggtagaactaccagaactaataca
gaaaaagccgttaaagacgtactcacaggcttggctggagaggtgaagtttgccgatgtc
gtcgccgaacaaaaaaccgaccggcagggcaacacgacggtgacagcatcgagaggggga
ctgatttggattctgtcgggagacgtttataatttactccccggtgcagaattgatggtc
aaaaatggcgatgccattgataccaatggagtattggcagaaaccaaactgaccactgtt
catggtggggtagtgcggttgccagaggcgattcccggtaaagctactagagaaattgag
attattaccgcttctgtggtgctagaccaggcagaaattagcgtgcatagttcccaaggg
cgcaataactacctaattaccaccaccaatcctaccaacggctctgtgtcagaattcaac
ctgcgggcgacaccagggactaaggtacagaatggtcaagtagtggcagaactgatagat
gaccagtaccggactacctctggaggcttgttgaagtttgctgaagtggaggtacagaag
aagggcaaagccaagttaggatatgaagtagtgcagggagggacgctgctctggatacca
gaagaaacccacgaagttaacaaggatatttctttgctgttggtagaagatggtcagctt
gtggaagcggggacagaagtagtcaaagacattttttgtcacactggtggggtagtagaa
gttacccagaagaacgacattttgcgcgaggtggtgattaaacccggtgaactgttaatg
gtagatgatccagagacagcgatcgctcatgacaataccttcctacaaccgggagaagaa
ctacaaggcatggtggctacggaattacggtatatccagtacgtagaaactccagaaggt
ccagggctgctgagtcgtccggtggtggaatttgctgtgccaactcacccagatgtccct
gctaccacttcagtgagtcagcacacagggcgctcgattcaactgcgggcagtgcaaaga
atcccctacaaagattcagaacgagttaagtctgtggagggagtcgaactgctgcggaca
cagatagtattggagatcgaacaggaaacggagggagaacacggggcttcacctttggca
gcggatatagaactaattactgactccgaaaatgcagaaattcagcggttacagttggtg
attttggaatctttggtagtccggcgcgatattacagcagatgcgacccaaggtagcacc
caaaccaacttggaagttgttgatggtgacaccattgatccaggatctgtagttgcccgc
acaaagattttgtgtaaggaagggggaattgtccgcggtgtacaacagggttcagaaacc
gtacgccgttgtttggtattgcgacccaacgatttaattaccgtcaataccaatgtcctt
cccaatctgaaaacaggggatttagtagtagaaggtagcacaatcgctactggtattgtt
gcagcagagtccgggcaagtggtgtcagtggtcagtggtcagttatccgcagccagtacc
aaaacaatggacaatggacaattgacaacggataaattatcacacactatcactctccgg
attggtcgtccttaccgagtcagccctggagcggtgctgcaagtggaagatggcgactta
gtgcaacggggtgataacttagtgttgttggtgtttgaacgagccaagactggagacatt
atccaaggtttgcctcggattgaggagttgctagaagctcgtaaacccaaggaagcttgt
attttggcccgtcgtccgggagaggtgaaggtagtttatggtgatggcgatgagataaca
tccattacccgtgaggcttactctatcaaaatagtcgaagctaatggtacggtaacagac
tatcctcttggacctgggcaaaacctgattgttcctgacggagcgcacatagtagctggg
caaccactaactgatggaccctctaatccccacgaaatcttagaaatattcttcagttta
ggctcggaggatgggatctatgcctgtgcaagtcacgctttgcagaaggtacaaaccttt
ttggtgaacgaagtacagatggtgtaccagtcccagggaattgagatttctgataaacac
atcgaagttatcgtccggcagatgacaaacaaggtgcggattgatgacggtggagatacg
acgatgttaccgggtgagttggtggaactacggcaggtggagcaggtgaatgaagctatg
tccatcacaggtggagctagagcggaatacacgcccatgctgttgggtattactaaggca
tctttgaacaccgacagctttatctctgcggcatcgttccaagaaaccaccagggtctta
actgaagctgctattgagggtaaatctgattggctgcgaggcttgaaggaaaacgtgatc
attggtcgcttgattcccgctggtactggttacaatacctacgaggaagtaggggtgatt
gatgactacgtgacagatatgggtattggtgtgctggatgaagttgatgacccattagat
atggtgttagatgaccgcacagcaaaactctataatctggatgcaccgggaatagtagaa
ggtggttttggtagcaaaataggagaacgactgattttagatgatgatgatgatctgatt
gctgatgaaattagcgaccttgtgatcgaagaagatgatgattttgaggaagaagaagaa
gacgatgataatgatgatgatgattttgatgatgaataa
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integrated database retrieval system
