Dolichospermum sp. UHCC 0315A: BMF77_00973
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Entry
BMF77_00973 CDS
T06185
Symbol
recJ_1
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dou
Dolichospermum sp. UHCC 0315A
Pathway
dou03410
Base excision repair
dou03430
Mismatch repair
dou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BMF77_00973 (recJ_1)
03430 Mismatch repair
BMF77_00973 (recJ_1)
03440 Homologous recombination
BMF77_00973 (recJ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dou03400
]
BMF77_00973 (recJ_1)
DNA repair and recombination proteins [BR:
dou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BMF77_00973 (recJ_1)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BMF77_00973 (recJ_1)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMF77_00973 (recJ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEI40407
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All DBs
Position
1052998..1055043
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AA seq
681 aa
AA seq
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MTNDKSSKRLPNQRWQVAAKNPEASLILANLTNISPIISQLLINRGMETPEDAKIFLDPE
SLILPSPLEEFPDLAASVELLELAIANKEKIAICGDYDADGMTSTAVLLRSLRALGADVD
YAIPSRMHDGYGINNRIVEEFHDEGVKLILTVDNGISAVEPITRARELGLKVIITDHHDV
PQILPPANAILNPKLIAESSPYRGVAGVGVAYILAVCLAQQLGEIKGLVQPLLALFTLGT
IADLAPLTGVNRRWVKRGLKLLPKSNLPGIQALIQIAGVQASEGEKNQTSKSLKPEDIGF
RLGPRINAIGRIGDPQIVIDLLTTDDFSIALAKAIQCEQTNTQRQQMCEEIEKEAITIVE
DLYINSLQKDRVLVVIKDNWHHGVIGIVASRLLERYGVPVFIGTYENETIIRGSARGIPE
FHVFAALDASRDLLGKFGGHKAAGGFSLPAENLPELRLRLSAFANQCLELQHLKPLLKID
TQVNIHEINQDIFQQLNILHPCGIDNSDPIFWTANVQVIEQKIVGKGHIKLTVSQTIDNQ
RQEIKGIAWRWGDYFPLPSRLDIAYKLRENNFNGKTTIEMELVGAKLPNHVVELFTNSPN
LSRASFEYKQRQYTCGIYENGISRELRVKNSEGKVLVMRPEDKFGLLGFNRENAEQVNLS
QPIYEGIVQNAIQALSTSVQN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgacaaatcttccaaacgcttacccaatcaacgttggcaagttgcagcaaaa
aatccagaagctagtttaatattagcgaatttaacaaatatctcgccaattatcagccaa
ttattaattaatcggggcatggaaaccccagaagatgccaagatatttttagatcccgaa
tctctgattttaccttctcctctcgaagaattccctgatttagctgcgagtgtggaatta
ttggaattagcgatcgccaataaagagaagatagctatctgtggagactatgatgctgat
ggtatgaccagtactgcagtactgctgagaagtcttagggctttgggcgctgatgttgat
tatgctattcctagtcgaatgcacgatggttatgggattaataaccggattgtcgaagag
tttcatgatgaaggggtgaaactaattctgacggtggataatggaatttctgcggttgaa
ccaattactagagccagagaactgggcttgaaagttattatcacagatcatcatgatgtt
ccccaaatattacctccagctaacgcgattctcaacccgaaactaatagctgaatcttct
ccctatcggggtgtggctggtgtgggtgtggcttacattttagccgtttgtttagcccaa
caattaggagaaatcaaaggtttagtgcagccactgttagctttatttaccttgggaact
attgccgatttagcccctttaaccggtgtgaatcgtcgctgggtaaaacggggtttaaag
ttattaccaaaatctaatttaccagggatacaagcattaattcaaattgccggagttcaa
gccagcgaaggagaaaaaaatcaaacttctaaatctttaaaacccgaagatattggtttt
cgattgggaccacgaattaatgctatcggcagaattggtgatccacaaattgtcattgat
ttactcacaactgatgattttagtattgcactagccaaagctatccaatgtgaacaaact
aatactcaacgtcaacaaatgtgcgaggaaattgaaaaagaagccattaccattgttgaa
gatttatatataaactctttacaaaaagaccgcgtattagttgttatcaaagataattgg
catcatggtgttattgggattgttgcttctcgcttactagaacgttatggtgttcctgta
tttattggaacttacgaaaatgaaaccataattcggggttcagcgcgaggaattcctgaa
tttcatgtatttgcagctttagatgctagtcgggatttattaggtaaatttgggggacac
aaagctgcgggaggattttctttaccagcggagaatttaccagaattgcggttgcgttta
tctgcatttgcaaatcagtgtttggaacttcaacaccttaaaccgctgttgaaaatagat
actcaagttaatattcacgaaattaaccaggatatttttcagcagttaaatattcttcac
ccctgcggtattgataactcagatccaattttttggactgctaatgtccaagtgattgaa
cagaaaatagttgggaaaggtcacattaaattaactgtatcccaaactatagacaatcag
cgtcaagaaattaaaggcatagcatggcgttggggtgattattttcccttaccatcaaga
ttggatattgcttacaaactgcgtgaaaataactttaatggcaaaactaccattgaaatg
gagttagtaggtgcaaaactcccaaatcacgttgttgaacttttcactaattcaccaaat
ctatcacgggctagttttgaatataaacagcgtcaatatacctgcggaatctatgaaaat
ggtataagtagagaattaagagttaaaaattctgaaggtaaagttttagtcatgcgacca
gaagataaatttggtttgttgggtttcaaccgcgaaaatgctgaacaggtaaatctatct
caacccatatatgagggaattgtgcaaaatgcaattcaggctttgtctacctctgtgcag
aattaa
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