Dolichospermum sp. UHCC 0315A: BMF77_02407
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Entry
BMF77_02407 CDS
T06185
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
dou
Dolichospermum sp. UHCC 0315A
Pathway
dou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMF77_02407 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dou03019
]
BMF77_02407 (rng)
03009 Ribosome biogenesis [BR:
dou03009
]
BMF77_02407 (rng)
Enzymes [BR:
dou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BMF77_02407 (rng)
Messenger RNA biogenesis [BR:
dou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMF77_02407 (rng)
Ribosome biogenesis [BR:
dou03009
]
Prokaryotic type
rRNA processing factors
BMF77_02407 (rng)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QEI41807
UniProt:
A0A5C0DWJ8
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All DBs
Position
complement(2540055..2542190)
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AA seq
711 aa
AA seq
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MPKQIIIAEQHQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLRLKRSAAAITELLTPQQKTLVQVMKEPTGSKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIKSESERNRLRALAILVKPAGMGLLVRTEAEGKPEEAIIEDLEVLQK
QWELVQQEAVTSRAPALLNRDDDFIQRVLRDMYGGDVNRIVVDSSTGLKRVKQYLQNWSG
GQTPQGLLIDHHRDRSPILEYFRINAAVREALRPRVDLPSGGYVIIQPTEALTVIDVNSG
SFTRSATARETVLWTNCEAAAEIARQLRLRNIAGVIVVDFIDMESRRDQMQVLEHFNKAL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGETCPTCGGLGHTVRLPGETENRLPIP
AADIPERFVPMPQRESRTPAPTRIPDIGSVAQATPRDTYDGFGDGFETEPEFSSLHLINH
PSYQELNDKRRTRTRRSRIGVNGANDKDESRLPTNPLAFVNHADLDLEEPELPIPEIAPP
TINKSGWTERPERAKVKLEPIKVEPPEIINVEMSAKEQDTFAEMGISPLLKLDREGKNPR
SVIINVVQPGQSPIEETEFIPEPIVMEKTIPEVVTIKIPKPTFELEEESSFPPLAIFPEL
TIVPQVKATETEGKTEIETEIEIEAETNNGSTPNRRRRRRSSALDPDGFGL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaattatcatcgcggagcagcatcaaatcgctgctgtattttcggaagat
caaatacaagaactcgttgtagctactggtcatcaccaaattggtgatatctatttaggt
gtagtagaaaatgtcttacctgggatagatgcggcttttgtcaatatcggcgacccagaa
cgcaacggttttattcacgtcactgatttaggtccattaaggctaaaacgtagtgcagca
gcgattacagaactgttgacaccacagcaaaaaaccttagtgcaggtgatgaaagaacca
acgggatcaaaaggccccagactgacaggtaacatcaccttacctggtcgttatgtcgtg
ttgatgccctacggacggggagtaaatttatcgagacggattaagagcgaaagtgaacgt
aatcgcctgagagctttggcaattctagtaaaaccagccggaatggggctgctggtacgc
acagaagcagaaggcaagccagaagaagcaatcattgaagatttagaagtgctgcaaaag
cagtgggaacttgtgcaacaagaagcagtaacctctcgtgcgccggctctactgaatcgt
gatgatgactttattcagcgcgttctcagggatatgtatggtggtgatgtgaatcgcatt
gttgttgattccagcacgggcttaaaacgggtgaagcagtatttacaaaattggagtggt
ggacaaacaccccaaggattgctaattgatcatcaccgcgatcgctctcctatcttagaa
tatttccggatcaatgcggctgtccgcgaagccctcagaccgagagtagacttaccatca
ggtggttatgtcatcatccaaccgacagaagccttaacggtcatagatgttaactccggt
tcttttactcgttccgcaactgctagagaaacagtgctgtggacaaactgcgaagctgcg
gcggaaattgctcgtcagttacggttgcggaacattgctggggtgattgtggttgatttc
attgacatggaatctcgacgtgatcaaatgcaagttttagaacactttaacaaagctcta
aaagctgataaagctcgtccccaaattgctcaactgactgaactaggtttggttgaactc
actcgtaaacgtcaaggccaaaacatttatgaattatttggcgaaacttgtcctacttgc
ggcggtttaggacataccgtcagattaccgggagaaacggaaaaccgcttacccattccg
gctgcggacatcccagagcggtttgtaccgatgccacaaagggaatctcggacacctgca
cctacccgcattcctgatattggtagcgtagcccaagccacaccccgcgatacctatgat
ggttttggagatggttttgaaactgaaccagaatttagctctctccatttgatcaatcat
cctagttaccaagaactaaatgataagcgccggacccggactcgtcgtagtcgtattggt
gtgaatggcgctaatgataaagatgaatcccgcttacctaccaatcctttagcttttgtc
aatcatgcagatttagacttagaagaacctgaattaccaatcccagaaatcgctccacct
actattaataaatccggttggacagaaaggccagaacgggcaaaagtcaaactagaaccg
attaaggtagaaccaccagagattattaatgtggaaatgtcagcaaaggaacaagataca
tttgctgaaatgggaatttctcctttactcaagttagatcgggagggaaaaaatccaaga
tcggtgattattaatgttgtccaaccaggacaatcacctattgaagaaactgaatttatc
cccgaaccaattgtaatggaaaagacaattcctgaagttgtcaccattaaaataccgaaa
ccaacttttgagctagaagaagaatcatctttcccaccattagcaatattcccagaattg
acaatagttccccaagtaaaagcaactgaaactgaaggaaaaactgaaatagaaacagag
attgaaatagaagctgaaactaataatggatctactcctaatcgtcgtcgtcgtcgtcgt
tcatcagccttagatccagatggtttcggactatga
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