Dolichospermum sp. UHCC 0315A: BMF77_02923
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Entry
BMF77_02923 CDS
T06185
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dou
Dolichospermum sp. UHCC 0315A
Pathway
dou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMF77_02923 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dou03019
]
BMF77_02923 (recQ_2)
03400 DNA repair and recombination proteins [BR:
dou03400
]
BMF77_02923 (recQ_2)
Enzymes [BR:
dou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMF77_02923 (recQ_2)
Messenger RNA biogenesis [BR:
dou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMF77_02923 (recQ_2)
DNA repair and recombination proteins [BR:
dou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMF77_02923 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GerE
DUF6115
HTH_36
HTH_38
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QEI42316
LinkDB
All DBs
Position
3081377..3083566
Genome browser
AA seq
729 aa
AA seq
DB search
MLQYPHLEKALKHHFGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPVLLKRG
LTVVVSPLIALMQDQVEALKNNNISATFLNSSVDYEEVCEREKKIMDGKIKLLYVAPERL
ISPRFLAVLDVVKEKVGIFTFAIDEAHCVSEWGHDFRPEYRQLRLLRKRYPHVPIVALTA
TATDRVRADIIEQLRLKQPSIHITSFNRQNLYYEVRNKSKSAYAELLEIVRENEGSGIIY
CLTRKKVDALTLKLQDDKVSVLPYHAGLSDDERSENQTRFIRDDVRVMVATVAFGMGINK
PDVRFVVHYDLPRNLEGYYQESGRAGRDDEPSKCTLFFNYGDIKTIEWSINKKTDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLSYFGERFPGNCGNCDNCLYPKPVQDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGSKNQRIIVNKHDQLSTYGIGKDKTVDEWRMLGRSLLHQGLV
EQTNDGHSILKLNALSWEVMRKQRPVSIAVPIAKKTTWEERSVKAADVEVLMQKLRSLRK
KLADEQAVPPYVIFHDSTLKLMAQSQPKTLDEFGNLSGVGSHKLSQYGERFLAEIQKYRQ
EQGLQEKTINRVSSSPHSHSPSDTELTTLELYNQGLSIENIAKQRNVKTATIINHISNLI
EKKQPVDLSKLVPLERQKKIWNVLEIVGDIALTPIRENLGESYSFDEIRLVRAKWRREKQ
KTIKDDIDF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtacccccacttagaaaaagccttaaaacatcactttggttatgatcaattt
cgccctggacaaaggcaaattatcgaagatgccttagaaaatcgtgatttaatggtagtc
atgcccacaggtgggggtaaatctttgtgctttcaattgccggtacttttgaaacgtggt
ttaacagtggtagtatcaccattgatagctttaatgcaagatcaagtagaagcactgaaa
aataataacatttctgccacatttcttaatagtagtgttgactatgaagaagtttgcgaa
cgtgaaaaaaagattatggatggtaaaataaaattactttatgttgccccagaacgcctt
attagtccaagatttcttgctgttttagatgtagttaaagaaaaagtcgggattttcaca
tttgccattgacgaagcccattgtgtctcagaatggggacatgatttccgcccagaatat
cggcaattaagattactccgaaaacgttatcctcatgttcccattgttgcgctgactgct
accgccacagatagagtcagggctgatattatcgaacagttaagattaaaacaaccaagt
attcacattactagttttaaccgccaaaatctttattatgaagtccgcaataaaagcaaa
agtgcttacgctgaattattagaaatagttagagaaaatgaaggttcaggaattatttat
tgtttaactcgcaaaaaagttgatgcactaactttaaaactccaagatgataaggtttcc
gttttaccctatcatgctggtttaagtgatgatgaaaggtcagaaaatcaaactcggttt
attcgggatgatgtgcgggtaatggtggctacggttgcttttgggatggggattaataaa
cccgatgtgcggtttgtagttcattacgatttaccccggaatttagaaggttattatcaa
gaatcaggacgagccggtagagatgatgagccttctaaatgtacattattttttaattat
ggtgatattaaaactattgaatggagtattaataaaaaaaccgatcctcaagaacaatta
atagctaaacagcaactaagacaggtaattgattatgcggaagggacagactgtagacgc
acaattcaattaagttattttggcgaaagatttcccggaaattgtggaaattgtgataat
tgtctttatcccaaacctgtccaagattggacaattgaagccatgaagtttttatcttgt
gtggctagatgtaaagaaagatttggaatgctacatattattgatgttttgcgaggttca
aaaaatcagagaattattgttaataaacatgatcaactttctacctacggaattggcaaa
gataaaacagtagatgaatggcgaatgttaggcagatcgcttttacatcaaggtttagta
gaacaaactaatgacggccattcaattttaaaacttaatgctttgagttgggaagtgatg
cgaaaacaacgcccagtttctattgctgttcccatagcgaagaaaactacttgggaggaa
agaagcgtcaaggcggcagatgtagaagttttaatgcaaaaattgcgatcacttcggaaa
aaactcgcagacgaacaagcagtaccaccctacgtcatcttccatgattctaccctcaaa
ttaatggcacaaagccaaccaaaaaccttagatgaatttggcaatctttccggggttggt
agtcataaattatctcaatatggcgaaagattcttagcagaaattcaaaaataccgccaa
gaacaagggttacaagaaaagactattaatcgagttagttcctcacctcattctcactca
ccttctgatacagaattaacaacattggaattatataatcagggtttgagtattgaaaac
atcgctaaacaacgcaacgttaaaactgccacaattatcaatcatatctccaatttaatt
gagaaaaaacaacctgtagatttaagtaaattagtccccttagaacgccaaaagaaaatc
tggaacgttttagaaattgttggtgatattgccctcacacccattcgggaaaatttaggt
gaaagctacagttttgacgaaattcgtttagttagagcaaaatggcgcagagaaaaacaa
aaaaccattaaagatgatattgatttttag
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