Dolichospermum sp. UHCC 0315A: BMF77_03436
Help
Entry
BMF77_03436 CDS
T06185
Symbol
rpoC_2
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dou
Dolichospermum sp. UHCC 0315A
Pathway
dou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMF77_03436 (rpoC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dou03021
]
BMF77_03436 (rpoC_2)
03400 DNA repair and recombination proteins [BR:
dou03400
]
BMF77_03436 (rpoC_2)
Enzymes [BR:
dou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMF77_03436 (rpoC_2)
Transcription machinery [BR:
dou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMF77_03436 (rpoC_2)
DNA repair and recombination proteins [BR:
dou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMF77_03436 (rpoC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QEI42823
LinkDB
All DBs
Position
complement(3679893..3681785)
Genome browser
AA seq
630 aa
AA seq
DB search
MRSPQTNQFDYVKIGIASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYCVLAPGNADTLSYKQLLSEDQWLEIEDAIYSEDSQ
LEGVEVGIGAEALLRLLADINLEQEAETLRDEIEKAKGQKRAKLIKRLRVIDNFIATGSQ
PEWMVMEIIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDASVWDVLQ
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPKATKGAGKYFSSLDD
VIMAYEAKQVELHAYIYVRFDGEIDSGEPDTEPVEVIEDKDAKGRLMSRTLIYKFRRVRE
DGEGNLISQYIYTTPGRAIYNQAIQEAIDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagatccccccaaactaatcaatttgactacgtaaaaattggcatagcttcaccagaa
cgcatccgtcaatggggtgaacggactttacccaatggacaacttgtaggtgaagttacc
aagccagaaactattaattaccgcaccctcaaaccagaaatggatggtttgttttgcgag
cgcatctttggaccagctaaggattgggaatgccattgtggtaagtacaaacgggtgcgc
catagagggattgtctgcgagcgctgtggtgtagaagttacagagtcccgcgtccgtcgc
cacaggatgggttttattaagttggcagcccctgtggctcatgtttggtatctcaaaggg
attcctagctatattgctattctcctagatatgccgttgcgggatgtggagcagattgtt
tatttcaactcctactgcgttttagcaccgggcaacgctgatactctcagttacaaacaa
ctgttgagcgaagaccaatggttagaaattgaagatgctatctacagcgaagattcccag
ttagagggtgtggaagttggcattggcgctgaagctctgttgcggctgttggcagatatt
aatttggagcaagaagcggaaaccctgcgggatgaaatcgaaaaggccaagggtcagaaa
cgggcaaaattaattaaacggctgcgggtaattgataatttcatcgctaccggttctcag
ccagaatggatggtgatggaaattattcccgtcattcccccagatttgcgccccatggtg
cagctagatggaggcagatttgccaccagcgatttaaatgatttgtaccgccgggtgatt
aatcgcaacaaccgtttggctagacttcaggaaattctcgcgccggagattattgtccgc
aacgagaaacggatgctgcaagaggctgtggatgccttgattgacaatggtcggcgggga
cggactgtggtgggggctaataaccgtccgctgaaatccttgtccgatattattgaggga
aaacaaggacgtttccgccaaaacctgctgggtaaacgggtggactattcgggacggtcg
gtaattgtggtcggtccgaatctgaagattcaccagtgcggtctacccagagaaatggcc
attgagttgtttcagccctttgtgatcaatcgtctgattcgttccggcatggtgaacaat
atcaaggcagcgaaaaagctgatttctcgcaatgatgccagtgtttgggatgtgttgcag
gaagtgattgaggggcatccagtgatgctaaaccgagcgccaacgttgcaccgattgggg
attcaggcctttgaaccgattttggtagaagggagagccattcaactccatcctttagtc
tgtcccgcctttaatgctgactttgacggtgaccaaatggcggttcatgttcccttgtcc
ttggagagtcaagctgaagcccggctgttgatgctggcttctaataatattttgtcacca
gcaacgggcaaaccgattgtgactcctagccaagatatggtgttgggagcatattatttg
acagcggaaaaccccaaggcaaccaagggggcgggtaagtatttctcctctttggatgat
gtaattatggcctatgaggcgaaacaggtagagcttcatgcctatatttatgtgcgtttt
gatggggaaattgattcgggtgaaccggatactgaacctgtggaggtaattgaggacaaa
gacgctaagggcaggctgatgagtcggactctgatttataagttccgccgggtgcgggaa
gatggggaagggaatttgatttctcagtatatttatacgactccaggacgagcaatttat
aaccaggcaattcaggaagcgatagatgcttag
DBGET
integrated database retrieval system
