Desulfosarcina ovata subsp. sediminis: DSCO28_00640
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Entry
DSCO28_00640 CDS
T06286
Symbol
pilR
Name
(GenBank) acetoacetate metabolism regulatory protein AtoC
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSCO28_00640 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dov02022
]
DSCO28_00640 (pilR)
02035 Bacterial motility proteins [BR:
dov02035
]
DSCO28_00640 (pilR)
Two-component system [BR:
dov02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DSCO28_00640 (pilR)
Bacterial motility proteins [BR:
dov02035
]
Pilus system
Twitching motility proteins
DSCO28_00640 (pilR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_22
Mg_chelatase
AAA
VpsR
bpMoxR
AAA_19
AAA_16
AAA_7
TIP49
nSTAND3
HTH_30
DUF1181
Parvo_NS1
ATPase
AAA_2
DUF5882
Motif
Other DBs
NCBI-ProteinID:
BBO79498
UniProt:
A0A5K7ZBF0
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All DBs
Position
73579..74970
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AA seq
463 aa
AA seq
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MPATPYRILVVDDELSMRELLEFMLEKQGYGVLCAANGKSALATIEKEPYDLLLCDIRLG
DMTGLEVLKASKKKNPHVTVIMISAFATTETAVEAMNQGAFDYVPKPFENKELLQTIANA
LERKTLEKEKHALDNQLKESVHFGKIVGNSPRMLHIYEMIRQVARTRSSVMITGESGTGK
ELIARAIHEQSDRVNEPFVTINCGGIPENLLESEFFGHCKGAFTGATADKQGLMEIAHKG
TLFLDEVAELSVPMQVKLLRAVQERVFRPVGGTRDVSVDIRIISATNKKLEDEVIAGNFR
EDLFYRLNVIEIKIPPLRERKGDLLSLAQHFLEKYSNELGKQVTKFSSYAIDLLKKYDFP
GNIRELENLIERSVALSNTNILLPDSLTMSIHKKRWIEGVRNRRFDVDEVAHGVALDGIL
EEIERAYIEKAMECAQGNKNKAAELLGLSLRSFRYRIDKLNVN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaacaccctatcgaatacttgttgttgatgatgagttgagcatgcgtgaactg
ctggaattcatgctggaaaagcaggggtacggcgttctttgcgcggccaatggcaaatcg
gcgctggcgacgattgaaaaagaaccttacgatcttttgctttgcgacatccgcttgggg
gatatgaccggcctggaagtgttgaaggcatccaaaaagaaaaacccgcatgtcacggtg
atcatgatttccgcttttgccacgaccgagacggcggtggaggcaatgaatcagggcgct
ttcgattatgttcccaagccttttgaaaacaaggaattgcttcagaccatcgccaacgcg
ctggaacggaagaccttggaaaaagaaaaacatgccctcgacaatcaactcaaggaaagc
gttcattttggtaaaattgtgggaaatagcccacgaatgttgcatatttatgaaatgatc
cgtcaggttgcccgaacgcgcagcagcgtgatgattaccggtgaaagcggcaccggcaag
gaactgatcgcaagggcgattcatgaacagagtgatcgggtaaatgagccgtttgtgacc
attaattgcggtggtattcccgagaacctgcttgaaagtgaattctttgggcattgcaag
ggcgcttttaccggggccaccgcagacaagcaagggctgatggagattgcccacaagggc
accctgtttcttgatgaagtggctgaattgagtgtccccatgcaggtcaagctgctccga
gcggttcaagagcgggttttccggccggtcggcggaacccgggatgtcagtgtggatatc
cggattatctcggctaccaacaaaaaactggaggatgaggtcatcgccgggaatttccgg
gaggatttgttttatcgattgaatgttatcgaaatcaaaattccaccgttaagggaaaga
aagggtgatcttctgtcactggcgcaacattttctggaaaagtattccaacgaattaggt
aaacaggtcactaaattttcttcctatgcgattgatttgttaaagaaatatgacttcccc
ggcaatatccgcgagttggagaacctgatcgaaagaagcgtggccctgtccaacaccaat
atcttgctgccggacagcctgaccatgtcgattcataaaaaacgctggatcgaaggggtc
cgcaaccggcgcttcgatgtcgacgaggtggcccatggtgttgccttggatggcatattg
gaggaaatcgaacgggcatatatcgaaaaggccatggaatgtgcccaggggaataaaaac
aaggcggccgagttgttgggcctgagcctccgctcttttcgatacaggattgacaagctg
aacgtaaattag
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