KEGG   Desulfosarcina ovata subsp. sediminis: DSCO28_00930
Entry
DSCO28_00930      CDS       T06286                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
dov  Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:dov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dov03019]
    DSCO28_00930
Messenger RNA biogenesis [BR:dov03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     DSCO28_00930
SSDB
Motif
Pfam: RapZ-like_N PapZ_C CoaE AAA_29 AAA_22 AAA_18 AAA_16 AAA_30 AAA_23 SKI Zeta_toxin NACHT
Other DBs
NCBI-ProteinID: BBO79527
UniProt: A0A5K7ZHV7
LinkDB
Position
complement(102150..103025)
AA seq 291 aa
MKKIPITIVTGQAGSGKSTALAAFEDSGCYCVDNMPVALLPQFLSLPAGNADAFSGLVFG
MDVRDSGFPLNYDTVVNRLRQNQFRFRLIFLEADEATLVRRYSQTRRKHPLSIDKNLHDA
IREEQILLTPLRDKADRIIDTSTLNVHELKTIVRKMATDITKNDAMQTEILSFGYKYGLP
VQADLVMDVRFLKNPYFVETLRPLNGETEKIRAFVLNNEQTCLFLRRYIDLLDILIPQYE
AEGKAYLTIAIGCTGGRHRSVVIAKQIYDHIVASGRKAELAHRDIDKSISP
NT seq 876 nt   +upstreamnt  +downstreamnt
gtgaaaaaaattcccattaccatcgtcaccggccaggcgggttctgggaaaagcacggcc
ttggctgcgtttgaggattcgggctgctattgtgtggacaacatgcccgtggcactgctg
ccacaatttttatccctgccagccggcaatgccgatgcatttagcggtttggtgtttggc
atggacgttcgggacagcggttttcctctgaattatgacaccgtcgtcaatcgccttcgg
caaaatcaatttcgctttcggctgatctttctcgaagccgatgaagcaaccctggttcgt
cgatatagccagacgcgccgtaagcatcctctgtccatcgacaaaaatcttcacgatgca
atccgtgaagagcaaatccttctgaccccactgcgcgacaaggccgatcggatcatcgac
acctccacactcaatgttcacgaacttaaaaccattgttcggaaaatggccacggacatc
acaaaaaatgacgcgatgcaaacggaaatcctttcatttggctataaatacgggctgccc
gtgcaggcagacctggtcatggatgtccgttttctgaaaaacccctacttcgtggaaacc
ttgcgaccacttaacggagaaactgaaaaaattcgcgcgttcgtcttgaataatgagcaa
acctgtttatttttacggagatacatcgacctgctggacattttgattccccaatatgaa
gccgaggggaaagcctatctcaccattgccatcggctgtacaggaggtcgtcatcgttct
gtggtgattgcaaaacaaatttatgatcatattgtggcgtcgggtcgtaaagcggaactg
gcccatcgcgatattgataaatcaatttcaccataa

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