Desulfosarcina ovata subsp. sediminis: DSCO28_01010
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Entry
DSCO28_01010 CDS
T06286
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00541
Biosynthesis of various nucleotide sugars
dov01100
Metabolic pathways
dov01250
Biosynthesis of nucleotide sugars
Module
dov_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSCO28_01010 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
DSCO28_01010 (kdsA)
Enzymes [BR:
dov01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DSCO28_01010 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
Lipid A
DSCO28_01010 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
DUF5091
Motif
Other DBs
NCBI-ProteinID:
BBO79535
UniProt:
A0A5K7ZGY1
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All DBs
Position
complement(108119..108907)
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AA seq
262 aa
AA seq
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MKSQRPFFLVSGPCVIENEAVTLRIATRLKAITDDLGIPFTFKASYDKANRTSITSFRGP
GLTDGLRTLSRIKETLGVAVISDVHRISEVEAAAKVLDVIQIPAFLCRQTDLILAVATTG
KPVNIKKGQFLAPWDMVNIVEKVRSVSSTQPMITERGVMFGYNNLVVDFRGIQIMQQTGC
PVIFDATHSVQLPGGAGKSSGGQREFAPVLARAAVAAGADGIFLEVHEAPDKALCDGPNS
LDLDQLPDLLTQLIAIKTAVTA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccaacgccctttttttttggttagcggtccttgcgttatcgaaaacgaggcc
gtcaccctacgcattgccacccggctcaaagcgatcaccgacgatctcggcatcccgttt
accttcaaggcctcctatgacaaggccaaccgtacctcgattacctcattccgggggccg
ggcctgaccgatggtctacgaaccctgtcgcggataaaagagacgctgggcgttgccgtg
atttcggatgtccatcggatcagtgaggtcgaagcggcggcaaaagtcctcgacgtcatc
cagattcccgcgtttctatgccggcagacggatctcattctggccgtggccacaaccggc
aaaccggtaaatatcaaaaaaggccagtttctggccccctgggacatggtcaacattgtt
gaaaaggtgcgttcggtttccagtacccaaccgatgatcaccgagcgtggggtaatgttc
ggatacaataacttggtggtggacttccgtgggattcagattatgcagcagaccggctgc
ccggtgattttcgacgccacccacagcgtccagctgcccggtggggcgggaaaaagctcg
gggggccagcgcgaattcgctccggtgctggcgcgcgccgccgttgccgccggggccgac
ggaatctttctggaagttcatgaagcccccgacaaggccctttgtgacggccccaactcc
cttgatctggaccaactgcccgacctgttgacccagctgattgccatcaaaaccgcagtg
actgcctga
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