Desulfosarcina ovata subsp. sediminis: DSCO28_03790
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Entry
DSCO28_03790 CDS
T06286
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02020
Two-component system
dov02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSCO28_03790 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSCO28_03790 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dov03021
]
DSCO28_03790 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dov02035
]
DSCO28_03790 (fliA)
Transcription machinery [BR:
dov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSCO28_03790 (fliA)
Bacterial motility proteins [BR:
dov02035
]
Flagellar system
Flagellar assembly proteins
Stator
DSCO28_03790 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_37
HCMV_UL139
Motif
Other DBs
NCBI-ProteinID:
BBO79813
UniProt:
A0A5K7ZQQ1
LinkDB
All DBs
Position
397758..398516
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AA seq
252 aa
AA seq
DB search
MDLAQQREANFGKDNHLLRNQIISEYLPYVKRIVNRIAVHLPATIEVDDLINVGVIGLIQ
AIERYDPSRDNKFITYAVFRIKGAVLSELRSRDFLGRTTRRKIRDLEKAYLKLEQKLGRD
VTDEEVAEEMDMDLEQFYKVKRMSSISFVSFEEVGYTSHSEGTSVSGSLAGGDTSDALSL
TTMKEIKSTIAKNIDLLPEKEKLVISLYYSDELTMKEIGQVLNITESRVSQIHAQAIIRL
RSKLRRDGLLEE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcacagcaaagagaagcaaacttcgggaaagacaaccatcttttacgaaat
cagattatcagcgaataccttccttatgtgaagcggatcgtcaatcgcattgccgtgcat
ctgcccgccaccattgaagtggatgacctgatcaacgttggggtcatcgggttgattcag
gccattgaacggtatgacccttcccgtgacaacaagtttatcacctatgcggtgttccgc
atcaagggtgccgtgttgagcgaattacgctcacgcgattttctggggcgaaccacgcgg
cgaaaaattcgtgacctggaaaaagcgtatctcaagctggagcagaagctggggcgtgat
gtgacggatgaagaggtcgctgaagagatggatatggacctggaacagttttacaaagtg
aaacgcatgtccagcatttcattcgtcagtttcgaggaggtcggctacacctcccacagt
gagggcacatccgtatccgggtcactggccggtggggataccagtgatgcactctcactg
accactatgaaagagatcaaatcaacgattgccaaaaatatcgacttgttgcctgaaaaa
gaaaaactggtcatttctctctactattccgatgagttaaccatgaaagagattggccag
gtgctcaatatcacggaatctcgggtctcccagattcatgcccaggccatcatccggctc
aggagcaaactccgtcgggatgggcttttggaagaataa
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