Desulfosarcina ovata subsp. sediminis: DSCO28_03950
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Entry
DSCO28_03950 CDS
T06286
Symbol
kdsB
Name
(GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00541
Biosynthesis of various nucleotide sugars
dov01100
Metabolic pathways
dov01250
Biosynthesis of nucleotide sugars
Module
dov_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSCO28_03950 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
DSCO28_03950 (kdsB)
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
DSCO28_03950 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
Lipid A
DSCO28_03950 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
BBO79829
UniProt:
A0A5K7ZJE0
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Position
411150..411896
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AA seq
248 aa
AA seq
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MRVVVIIPSRYGSSRFDGKPLAPICGRPMVQWVYQRASQSSRVETVHVATDDERIRAAVK
AFGGNVMMTASTCRSGTDRVAEAAERLGLGMRDVVVNIQGDQPLVDPRCFNAVVKPFTED
PSVKMSTLAFAIVDEREITDPKDVKVTFDENGDALYFSRATIPMGRDGFSGYTIYKHLGV
YAYTREFLECFRSLSPGRLEEIEKLEQLRAMEHGHRIRVVVTPYDSPEVDLPVDIRRIEE
KMAAMGIG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttgtggtgattattccatcacgctacggatcgtcccggttcgatggcaaaccg
ctggcgcccatctgtggccgtccgatggtgcagtgggtttatcagcgggccagtcagtcc
agtcgcgttgaaacggttcatgtggcaaccgatgacgaacggattcgggccgcggtcaag
gcgtttggcggtaatgtgatgatgaccgcatcgacctgtcgatcgggaaccgaccgtgtt
gctgaggcggccgaacggcttggtttggggatgcgggatgtggtggtcaacatccagggg
gaccagccgctggtcgatccccgttgttttaatgcggtggtgaaaccgtttaccgaagac
ccgtccgtgaaaatgagcacgctggcctttgccattgttgacgaacgggaaatcaccgac
cccaaggatgtcaaggtcaccttcgacgaaaacggcgacgccctctatttttcccgtgca
acgattcccatggggcgtgacggcttttccgggtacaccatttataagcatttgggggtg
tacgcctatacccgggaatttctcgagtgcttccgatcgctttcaccgggccggctggag
gagattgaaaagcttgaacagcttcgggccatggagcacggccaccggattcgggtggtg
gtgaccccttacgactcgccggaggtggatctgccggtggacatccggcgcatcgaggaa
aagatggccgccatggggatcggctga
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