Desulfosarcina ovata subsp. sediminis: DSCO28_04020
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Entry
DSCO28_04020 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
DSCO28_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
RNase_H_2
ResIII
DNA_pol_B_exo2
Cas3-like_C_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBO79836
UniProt:
A0A5K7ZFV3
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All DBs
Position
419389..422280
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AA seq
963 aa
AA seq
DB search
MTDNNSIHDYLAALNTAPAFGGQVVFHREFAASTPEFGETVEPWPPSIGQLMETMGIKRL
FAHQARTIDRVRAGSHTVAATPTASGKTLTYLLPVIEAAVADESVTALFIYPLKALAQDQ
NKTIGRMAADLNDVDLKSEIYDGDTSAYRRRKIRDNPPHILLTNPEMIHLSILPHHDIWE
RLLVRLRFVVVDEVHTYRGILGSHMAQVFRRLIRLCGYYGAAPTFVFTSATVANPAELAS
QLTGLNVGTVQKSTAGTGTRHLLVMDPLDGPLRATVILLKAALHRGLRTIVYTQSRKLAE
LLTVWARSRSGGFADRISAYRAGFLPQERREIEAKLSSGELLAVITTSALELGIDIGSLD
LCILVGYPGSIMATWQRGGRVGRAGQESAVILVAGEDALDHYFVRHPQQLVQRPPEAAVI
NPHNPDVMSRHLVCAAAELPLKMDDPMLVPESVKRCVNQLIAAGDLYLSADGRTCYSPLK
NPHRHVDLRGSGSRFAILEAPANTRLGEIDGVRVYRETHPGAIYLHRGETYQVAALELET
RKVIVTRCQVNYHTRVRSGKETRILEIFDQQPVYGTVMAIGRLQVTEQVTGYDRIQTRTG
TVLERIGLDLPPIVFETHGLWFTVPQAVVDQAEQERIHVMGGLHAMEHAAIGVFPLLVLA
DRNDLGGISTPFHPQLQGAGIFVYDGIPGGAGFCVQAFADGQGLLEATLAAITGCPCETG
CPSCVHSPKCGSGNRPIDKAGAIFLLRRLIAGNGLSAPIRLPEIEFPEPSGREADLQEAT
LSAADPSSQYGVLDVETQLSAQEVGGWHRAERMRVSCAVLYDSRTDSFYEFVEGQMPMLM
DHLKQLELIVGFNIRRFDYRVLSAYTDLDFASLPTLDILEKVKDQLGYRLSLDHLASATL
GAGKTADGLDALKWWKEGKMAKILTYCRSDVAITRDLFQFGRDNHYLLFQNKAKQTVRLP
VRW
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaacaattccatccatgattatctcgcggcattgaacacggcaccggcattt
ggcggacaggtggtttttcaccgggaatttgcggcaagcacaccggaatttggtgaaacg
gtggaaccatggcccccgtcgattggccagcttatggaaaccatgggcatcaaacggctg
tttgcccatcaggcacggaccatcgatcgggtgcgggccggtagccataccgtggcggcc
acgccgaccgcctcgggcaaaaccctgacctatctccttccggtgatcgaggcagccgtt
gcggacgaatcggttaccgccctgttcatttatccgctcaaggccctggcccaggatcag
aacaaaaccatcggcaggatggccgccgatctgaacgacgtcgatctcaaatccgaaatt
tacgacggcgatacgtcggcctaccgtcgccgaaaaattcgtgacaacccgccccatatc
ctgctgaccaacccggagatgattcatctttcgattttgccccaccacgatatctgggaa
cgccttttggtccgattgcgttttgtggttgtcgacgaggtacacacctatcgcggcatc
ctgggatcgcacatggcccaggttttccgccgcctgatccgattgtgtgggtactatggc
gctgctccgacatttgtgttcacttcggccacggtggccaatccggctgagctggccagc
cagctgaccggcctgaatgtcggcaccgtccagaagagcactgccggtacgggaacccgc
cacctgctggtgatggatccgctggacgggcctttaagggccacggtcatcctgctcaag
gccgccttgcatcgcggtctgcgaacgattgtctatacccagtcacgaaaactggccgag
cttttgaccgtctgggcccgcagccggtcgggcgggtttgccgaccgcatcagcgcatac
cgggccggttttctgccccaggagcgacgcgaaatcgaggccaagctttcctcgggggag
ctgctggccgttatcaccaccagtgcgttggagttgggcatcgacatcggcagcctggac
ctgtgtattctggttggctatccgggctccatcatggccacctggcaacggggcggccgg
gtgggccgagccggtcaggaatcggcggtgattctggtggccggcgaagatgccctggat
cactattttgtcaggcatccccagcaactggtccagcggccgcccgaagcggcggtgatc
aacccccataatccggatgtcatgtcgcgccatctggtttgcgccgctgccgaactgccg
cttaaaatggacgaccccatgctggtgccggaatcggtgaagcggtgtgtcaaccaactg
atcgctgccggggacctttatctgagcgccgatggccgcacctgttattcaccgctgaaa
aaccctcaccggcatgtggatttaaggggctcgggatcccgttttgccatcctggaggcg
cccgccaatactcggttgggtgagatcgacggtgtccgcgtctaccgcgaaacccatccc
ggagccatctaccttcaccgcggagagacataccaggtggccgcccttgaacttgaaacg
cgaaaagtgatcgtaacccgctgccaggtgaactaccacacccgggtgcgctccggcaaa
gagacccggatccttgaaattttcgatcagcagccggtctatggaaccgtgatggccatc
gggcgcctgcaggtgaccgaacaggttaccggttatgaccgcatccagactcgcacggga
accgtcctcgaacggatcggcctggacctccctcccatagtgttcgaaacccatgggctc
tggttcaccgttccccaggcggtggtcgatcaggcggagcaagagcggattcacgtcatg
ggaggcctacacgccatggagcatgccgccattggcgtctttccactgctggtattggcc
gaccgcaacgatttggggggcatctcgaccccgtttcatccccagcttcaaggcgccggt
atctttgtctatgacgggattcccggtggggccgggttctgcgtgcaggcgtttgccgat
gggcagggccttctcgaggccaccctggcggccatcaccggctgcccgtgtgagaccggt
tgccccagttgcgtccattcccccaagtgtggatccggcaaccggcccatcgacaaggcc
ggtgcgattttcctgttgcgtcggctgattgcaggcaacggcctatcggcaccgatccga
ctacccgagattgaattccccgagccctccgggcgtgaggctgatttgcaggaagcgacg
ctgtctgcggctgatccgtcttcgcaatacggagtattggacgtcgagacccagctgtcc
gcccaggaggtgggcgggtggcaccgcgccgagcgcatgcgggtgagctgcgcggtgctc
tatgattccagaaccgacagcttttacgagtttgtcgagggccagatgcccatgctgatg
gaccacctcaaacaactggaactgatcgtcggtttcaacatccggcgcttcgattaccgg
gtgctgtccgcatacacagatctggattttgcatcgctgcccaccctggatatcctcgaa
aaggtcaaggaccagctcgggtaccggctctccctggaccacctggcctcggcgaccctg
ggtgccggaaagacggctgacgggctggacgccctgaaatggtggaaagagggcaagatg
gccaagatcctgacgtactgccgctcggacgtggccatcacccgtgacctgtttcaattc
ggcagggacaaccactatctgctttttcagaacaaggccaagcagaccgtacgcctgccg
gtgcgctggtaa
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