Desulfosarcina ovata subsp. sediminis: DSCO28_06630
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Entry
DSCO28_06630 CDS
T06286
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03030
DNA replication
dov03430
Mismatch repair
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSCO28_06630
03430 Mismatch repair
DSCO28_06630
03440 Homologous recombination
DSCO28_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dov03032
]
DSCO28_06630
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_06630
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSCO28_06630
DNA replication proteins [BR:
dov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSCO28_06630
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSCO28_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_9
PAS_4
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
HCR
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BBO80097
UniProt:
A0A5K7ZJE8
LinkDB
All DBs
Position
727579..729765
Genome browser
AA seq
728 aa
AA seq
DB search
MRLNNKFWLFAVVCMAFTTSITAILAVIFWRQIDPAGHALLIRIFKEQFWYFFSTGVFLF
AAFGFTLDWFFRFYIIPLNQIIEETRIMNTVNPAHRMNIDGSREIRVLSDLVNALGDQYQ
SARHIIDQTVASARAETEAEKNILATIMAELTQGVLICDPEGRILLYNRQAKRVLSKVRS
DESTNGSGESGQQSVPDGFIGLRRSIYSLIDEHLIQYALKEINQKIDQHSESVASHFVVV
THDRRQIGVETLPILDADKGFAGFALILSDITQQLERSGRMDRQFKAMDKNLRSAIAAIR
STVDLMIQFPEMEADRKNAFLGIIADETKVLSRLSRSGLGEGSYPRSRWPRSPIRATDFI
ATVKNEAAGITDLDVEVAECDARCMIRVDSYAMLLAIVFVLEHLKTECQAQCKRIRLTVP
GNLVQLDLIWQGPPVKIETLRRWNELPVAAERKGYPLTLREVLAHNHAEIWPHAHRDKSG
EACLRIFIPMIQSENPPEDVRKIPQLPKGRPEFYDFDLFHQAGQTPEIEKRLLGELVYTV
FDTETTGLDPRGGDEIISIGAIRVVNGRLLHTETINQLVNPRRRVPPESIKFHGITDKML
QGKPTIEKVLPFFQRFVQNTVLVAHNAAFDMLMLQMNEKKTGIRFINPVLDTMHLSAILH
PSHSDHTLDAISQRLGVTVTRRHDALGDAIATGEVFLKMIPLLNEKGIFTQKDARLASQR
TYYAQLKY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaacaataaattctggcttttcgccgttgtctgcatggcgtttaccacatcc
atcacggccatcctcgccgtcattttctggcgtcaaatcgatcccgccggccatgcgttg
ttgattcgaattttcaaggaacagttctggtatttcttcagtaccggtgtctttctgttc
gcggcattcggttttaccctggactggtttttccgtttttacattatccccctgaaccag
atcatcgaagagacccggatcatgaacacggtcaatcccgcccatcggatgaatatcgat
ggcagccgggagatcagggtgttgtccgacttggtcaatgcgctgggcgatcagtaccag
tccgccaggcacattatcgatcagaccgtcgcttcggccagggcggaaaccgaagcggaa
aaaaacattcttgccaccatcatggccgaattgacccagggggtgctgatttgtgatccg
gaaggacggatcttgttgtataaccgccaggccaaacgcgtgttgagcaaggtgaggagc
gacgaatcgaccaatggaagcggtgagagcggacagcagtcggtgccagatggcttcatc
ggtttaagacgttccatctattcgctgatcgatgagcacctgattcaatatgcgcttaaa
gagatcaaccagaaaatcgatcaacacagtgaaagtgtcgcctctcattttgtggttgtg
acccacgatcgccgccagatcggtgtggagacactgccaatccttgatgcagacaaggga
tttgccggatttgcattgattctgagcgatatcacccagcaacttgaacgctccgggcgg
atggatcggcagtttaaagccatggacaaaaacctgcgttcggccatagcggccatccgc
tccacggtagatctgatgatccagtttcccgaaatggaggcggatcgcaagaacgcattt
ctcggcatcatcgccgatgagaccaaggtcctgagtcggctttcgcgcagcggtttggga
gagggcagttacccgcgatcacgctggccacgctcaccgatccgggctacggattttatc
gccacggtgaaaaatgaagcggcgggaatcaccgatcttgacgttgaagtggccgaatgt
gacgcccgctgtatgatccgggtagatagttacgccatgcttctggccatcgtttttgtt
cttgagcatcttaaaaccgagtgccaggcgcagtgcaaacgaatccgcctgaccgttccc
ggcaacttggtccaattggatctcatctggcaggggccgccggtgaagattgaaaccctg
cggcgctggaacgaattgcctgtggccgccgaacgcaaaggctatccgttgacgttaaga
gaggtgctggcacacaaccatgcggaaatatggccccatgctcatcgtgacaaaagtggc
gaggcctgcctgcggatttttattcccatgattcaatcggaaaacccgcctgaggatgtc
cgcaaaattccccaactgcccaagggtcgacctgaattttacgatttcgatctctttcat
caagccggtcagacaccggagatcgagaaacggctattgggcgaactggtttatacggtg
ttcgatacggaaaccaccggccttgaccccaggggaggggatgaaatcatatccatcggc
gccatccgggtggtgaacggtcgattgctgcacacggaaaccatcaatcaattggtcaat
ccccggcgtcgggtgccaccggaatcgataaaattccacggcatcaccgacaaaatgctg
caaggcaagccgaccattgaaaaagtgcttcctttttttcagcgcttcgtccagaatacc
gttcttgtggctcacaacgccgcctttgatatgttgatgctgcaaatgaatgagaaaaaa
acaggtatccgattcatcaatccggttttggataccatgcatctttccgccatccttcat
ccgtcacacagtgatcacacgctggatgcgatcagtcagcgtctgggcgtcaccgtgacc
cggcggcacgatgcgctgggggatgccatcgccaccggtgaggtattcctcaaaatgatt
ccactgctcaatgaaaaggggattttcacccagaaggatgcacgcctggcctcccaacga
acctactatgcccaactaaaatattga
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