Desulfosarcina ovata subsp. sediminis: DSCO28_08600
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Entry
DSCO28_08600 CDS
T06286
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00521
Streptomycin biosynthesis
dov00523
Polyketide sugar unit biosynthesis
dov00541
Biosynthesis of various nucleotide sugars
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01250
Biosynthesis of nucleotide sugars
Module
dov_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSCO28_08600 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSCO28_08600 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSCO28_08600 (rmlC)
Enzymes [BR:
dov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DSCO28_08600 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBO80294
UniProt:
A0A5K7ZG41
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All DBs
Position
complement(913288..913848)
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AA seq
186 aa
AA seq
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MKIIRTRIPDVFTLEPKVFGDNRGFFFESYNENVFKSLTGNDPAFVQDNHSKSKKNVLRG
LHYQIRQPQGKLVRVICGDVFDVAVDIRRSSPTFGKWVGEYLTAENKKQLWVPPGFAHGF
LVLSDVAEFLYKTTDYYAPEFERCIRWNDPDLSIQWPINDAPLVSEKDAGGVLFRDAEVF
TYIQNL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatccgaacccgtattcctgatgtctttacccttgaaccgaaagtgtttggt
gacaatcgcggctttttttttgaaagctataatgaaaacgtatttaaatcattgactggc
aacgatccagcgtttgttcaggacaatcattccaaatcaaaaaaaaatgttttacgcggc
cttcactatcagatcaggcaaccccaggggaaactggtccgcgtgatttgtggggatgta
tttgatgtggcggtggacatccgccggtcgtcaccgactttcgggaaatgggtcggagaa
tatctcactgctgaaaacaaaaaacaattatgggtcccgccaggattcgcccatggtttt
ctggtcctgagcgatgtggccgaatttttgtacaaaacaactgattattacgctcctgaa
ttcgaacgctgtatccgctggaacgaccccgacttgagcattcaatggccaatcaacgac
gcccccctggtttccgaaaaggatgcaggcggggttttgttcagggacgccgaggtgttc
acatacattcaaaatttataa
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