Desulfosarcina ovata subsp. sediminis: DSCO28_09910
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Entry
DSCO28_09910 CDS
T06286
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_09910
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DSCO28_09910
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
BBO80425
UniProt:
A0A5K7ZJM8
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Position
complement(1053890..1054264)
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AA seq
124 aa
AA seq
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MSRIQGKNTKPELILRKALWACGMRYRLKSRLPGRPDLYFPGKKLAVFVDGCFWHGCPDH
CQAPKTNHSFWQKKLSNNKERDKEVNLLLKNEGWRVLRFWEHEVKNDLDGCIERIAREFQ
SADR
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaatacagggaaagaatactaaaccagaactgatattgagaaaagcactatgg
gcctgtggcatgcgttaccgtttgaaaagcaggctccccggacgaccagatctttacttt
cctggtaaaaagcttgctgtatttgtggatggctgcttttggcatggttgccctgatcac
tgccaagctcctaaaacaaatcattccttttggcaaaaaaaactttcaaataacaaagag
agggacaaagaggttaatttgttgctgaaaaacgagggatggcgggtcctgcggttttgg
gagcatgaggttaaaaatgatctggacggatgtattgagcgtattgcacgggagtttcag
tctgcagaccgatag
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