Desulfosarcina ovata subsp. sediminis: DSCO28_11760
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Entry
DSCO28_11760 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_11760
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_11760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
VWA_2
TSP_3
VWA
VWA_CoxE
DUF748
Motif
Other DBs
NCBI-ProteinID:
BBO80610
UniProt:
A0A5K7ZP61
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All DBs
Position
complement(1260036..1261286)
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AA seq
416 aa
AA seq
DB search
MKSLFAKLIFAFMVAGLLSACATFQPVPPFSPVDIDAGGHALKKQNAVFILDASASMEEG
SPQYKKFDQAKALLENMAKTMPANMPVQTEVRSFGHDPKFSSAITELLDDMGAFNRKDMT
TALAGISKAGGTSPMETAIDAAGEDLDGVSGNTAMIIVSDGKNMGSAPVAAAAALKEKMG
DSLCIYTVLVGDDAAGQKLMDAVAEAGGCGFATTGDALMDGAAMAGFITKVFIGDAIDSD
GDGVGDMMDKCPGTPAGVKVDAVGCPLDSDKDGVPDYLDKCPGTPIGTKVDSTGCPITVL
DSSKDEWSFHDILFDVNKAVIKPVSFGTLDAIVQALQQRPRLTVRVEGHTDITGSHAYNM
DLSKRRAKAVVDYLVNKGIASSRLTSEGYGPDRPIADNNTKEGRALNRRVNLVKTN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtctattcgccaagttgatttttgcgttcatggttgccggtctgttaagcgcc
tgtgccacctttcaaccggttcccccattctcaccggttgatatcgacgctggcggacat
gccctgaaaaagcaaaacgcggttttcattctcgatgcgtccgcttccatggaagaggga
tccccgcagtacaaaaagttcgatcaggccaaggcgctgcttgagaacatggccaagacc
atgccggcaaacatgcccgtacagacagaagtgcgtagtttcgggcatgatccgaagttc
tcatcagccatcaccgaactccttgacgatatgggtgccttcaaccgtaaggacatgacc
accgcgctggcgggcatctccaaagccggggggactagtcccatggaaacggccattgat
gccgccggcgaggaccttgacggcgtctccgggaatacggcaatgatcattgtcagtgat
ggaaagaacatgggatcggcacccgttgctgctgccgccgcgctgaaagaaaagatgggc
gattcgctgtgcatctatacggttctggtgggtgatgacgcggccggccagaaactgatg
gatgcggttgccgaggccggcggatgcggttttgcaacaacgggcgatgcattgatggac
ggcgcggccatggctggctttattaccaaggtgtttattggtgatgccattgacagcgat
ggcgacggcgttggcgatatgatggacaaatgcccggggacccccgccggtgttaaggtg
gatgcggtcggctgcccgctggacagtgacaaggatggcgtgccggattacttggacaaa
tgcccgggaacccccattggtacgaaggtcgattccactggttgtccgattactgttttg
gattcttccaaagacgaatggtctttccacgacattcttttcgatgtcaataaagccgtt
atcaaacccgtatcgtttggtacccttgacgccatcgtccaagcccttcagcagcgtccc
cgcctgacggtgcgggtcgaagggcatacggacattacgggatctcacgcatacaacatg
gatctttccaagcggcgtgccaaagctgtcgtcgattacctcgtcaacaaaggcattgcc
tcgtcccgcctcacttccgaaggctacggcccggatcgccccatcgcggataacaacacc
aaagaaggacgggcgcttaaccggcgtgttaatttggtgaaaaccaactaa
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