Desulfosarcina ovata subsp. sediminis: DSCO28_13030
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Entry
DSCO28_13030 CDS
T06286
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSCO28_13030 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dov01007
]
DSCO28_13030 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dov03016
]
DSCO28_13030 (aspS)
03029 Mitochondrial biogenesis [BR:
dov03029
]
DSCO28_13030 (aspS)
Enzymes [BR:
dov01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
DSCO28_13030 (aspS)
Amino acid related enzymes [BR:
dov01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DSCO28_13030 (aspS)
Transfer RNA biogenesis [BR:
dov03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSCO28_13030 (aspS)
Prokaryotic type
Other AARSs
DSCO28_13030 (aspS)
Mitochondrial biogenesis [BR:
dov03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
DSCO28_13030 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBO80737
UniProt:
A0A5K7ZL64
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All DBs
Position
1412828..1414645
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AA seq
605 aa
AA seq
DB search
MADILGEMRRTHHCNALGAKDMGKEVVLMGWVLRRRDHGGVIFIDLRDREGITQVVFNPE
INPDVHAKAHVIRNEFVLGVRGKVEPRPDGMVNPKLATGEIEVLVSELKILNPAKTPPFM
IEDNVDVSEVLRLKNRHLDLRRPPLQRNIITRHRTGAAARRFLNDNGFLDIETPVLTKST
PEGARDYLVPSRVNPGQFYALPQSPQLFKQLLMVSGFDRYYQIVRCFRDEDLRADRQPEF
TQIDMEMSFVGEEDLMAISEGMMNSIFSEVMGQSLGTPFPRLTWTEAMDRYGLDKPDTRF
DLELKDVSDIVEKSGFKVFASVVQKGGIVKALNAKGCIDFSRKEIDDLTAFVAVYRAKGL
AWIKVREDAWQSPIAKFFTDAEKAALAERIDMQPGDLVFFVADQPKVTNEALGHLRNHLG
KRLGLIDDSRFNFVWVTHFPMFEYDETEKRYQALHHPFTAPLEEDYDKLESDPLAVRSRA
YDLVLNGFEVGGGSIRIHDMELQQRVFAALGMPPATYQEKFGFLLDALESGAPPHGGIAF
GFDRLVMLLCGESSIRDVIAFPKTQKAACLLTNAPSEAAKAQLDELSLKLKLTVTEGQEK
SDGDG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacatccttggtgaaatgagaagaacccatcactgcaacgcccttggcgccaaa
gatatggggaaggaagtcgtcctgatgggctgggtcctcaggcgacgggaccacggcggc
gtgatttttatcgacttgcgcgaccgcgagggcattacccaggtggttttcaacccggag
atcaatcctgacgttcatgccaaggcccatgtcatccgcaacgagtttgtcctcggtgta
cgcggcaaggtggagccccggcccgacggaatggtcaaccccaaactggccaccggtgaa
atcgaggtgctggtgagcgagttgaaaatcctcaacccagccaagacaccgcccttcatg
attgaggacaatgtggacgtctccgaggtgctgcgcctgaagaaccggcacctggacctc
aggcggccgccgctgcagcgcaatatcattacccgccaccgcaccggagcggcggcgcgg
cgttttctcaacgacaacggcttcttggacatcgaaacgcccgtgctcaccaaaagcacg
cccgaaggggcccgggactatctggtgcccagccgcgtgaaccccggccagttttatgcc
ctgccccagtcgccgcagctgttcaaacagctactgatggtctccggattcgaccgctac
taccaaatcgtgcgctgtttccgcgacgaagacttaagggccgaccgccagccggagttc
acccagatcgatatggagatgtccttcgtgggcgaggaagatctcatggccatcagcgag
ggcatgatgaacagcatcttcagcgaggtcatggggcagtccctgggcacgccgtttccc
cggctcacctggaccgaagccatggaccgctacggcctggacaaacccgacacccgtttc
gacctggagttgaaggatgtctccgacatcgtggagaaatccgggttcaaggtgtttgcc
agcgtggtacaaaagggcgggatcgtcaaagccctcaacgccaagggctgcatcgacttt
tcgcgcaaagagatcgacgatttgactgccttcgtcgccgtttaccgcgccaaggggctg
gcctggatcaaggtgcgcgaggatgcctggcagtcgcccatcgccaagttcttcaccgat
gcggaaaaagccgcactggccgaacggatcgacatgcagcccggagacctggtctttttc
gtggccgaccagcccaaggtgaccaacgaggccctgggtcacctgcgcaaccacctgggc
aaacgcctgggcctgatcgacgacagccgtttcaacttcgtctgggtgacccactttccc
atgttcgagtacgacgagaccgagaaacgctaccaggccctgcaccacccctttacggcg
ccgttggaggaggattatgacaagctggagagcgatccgttagccgtacgctcacgggcc
tacgacctggtattgaacggattcgaggtgggcggcggcagtatccgtatccacgacatg
gaactgcagcagcgggtctttgccgccctgggcatgccgcctgcgacctatcaggagaaa
ttcggtttcctgctggacgccctggaatccggcgccccgccccacggcggaatcgctttc
ggattcgaccggctggtcatgctgctgtgcggcgagtcgtccatccgcgacgtgatcgcc
tttcccaaaacccagaaggcggcctgcctgctgaccaatgcgccctcggaggcagccaag
gcccagctggacgaactctcgctcaagctgaaactcaccgtcaccgaaggccaggaaaaa
agcgacggcgacggctga
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