Desulfosarcina ovata subsp. sediminis: DSCO28_13230
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Entry
DSCO28_13230 CDS
T06286
Name
(GenBank) Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSCO28_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_13230
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
GAF_3
AAA_5
AAA_2
HTH_8
AAA
Mg_chelatase
nSTAND3
Torsin
AAA_22
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BBO80757
UniProt:
A0A5K7ZL82
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All DBs
Position
1439087..1440592
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AA seq
501 aa
AA seq
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MKTDIVDTPTPIDHLKAISSWVSSVQDLDKLLHLIIESATNVVRAEAASLLLMDTKTNTL
YFKVATGTKGKEVKEFRVKLGEGIAGHVAQTGQALLIADAQQDSRWMRTISDRIDFETRS
MACVPLKINDRTIGVVQVINKQDDSRFSQADMDVLEEFSNLAALAIGSARSLEQVRQENQ
DLKKKLGEKHQIIGKSLILDKVLKDAQKLSRTKTTALIQGESGTGKELVARLIHRESPRR
DKPLVVLNCAALPEPLLESELFGHEKGAFTGATSRKIGKFEAAHEGSLFLDEIGEMAPGI
QAKLLRVLQEGVFYRVGGNTPITVDVRVLSATNKDLKKEVEEGNFREDLFYRLNVVQLDT
PPLRERLEDVPFLVNHFLEVFKKETGLLNLTVSQDAMDKMTHYEWPGNIRELRNAIERAV
VMGDGKTILPEDLPISASLPKFAGLRVGLTLDEALNEFKKEFILLNLQHTGGNRSKAAKI
MDIQRTYLSRLITRYGMRDLA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatattgtggatacccccacaccgattgatcacttgaaggcaatttcgtcc
tgggtctcttccgtacaggacctggacaagctactccacctgattattgaatcggccacc
aatgtcgtgcgcgcagaggccgcatcgctgcttctgatggacaccaaaaccaacacgctt
tatttcaaagtggccaccggcaccaagggcaaggaggtcaaggagttcagggtaaagctg
ggtgagggtatcgccggccatgtggcgcagaccggacaagccctgctcattgccgatgca
cagcaggacagccgatggatgcgcacgatcagcgatcgcatcgattttgaaacccgttcc
atggcctgtgtgcccctgaagataaacgatcgcaccatcggcgtggtgcaggtcatcaac
aaacaggacgacagccggttcagccaggcggatatggatgtcctcgaagaattttccaac
cttgccgctctggccatcggcagtgcaaggagcctcgagcaggtccgccaggaaaatcag
gacctgaaaaaaaagttaggcgaaaagcatcagatcatcggcaaaagcttaatcctggac
aaggtactgaaagatgcccagaaactttcacgaaccaaaaccacggccctgattcaaggg
gaaagtggaaccggtaaggaattagtggcccgcctgatccaccgcgagagtccacgcagg
gacaaaccactggtggtcctcaactgtgccgcgcttcccgaacccctgctcgaatcggaa
ctgttcggccatgagaaaggtgcctttaccggagcaaccagccgtaaaattggaaaattt
gaggctgcccatgaaggcagtctctttctcgatgagatcggagaaatggccccgggcatc
caggccaaactgcttcgggtacttcaggaaggggtcttttatcgggtcggcggcaacaca
ccgattaccgttgatgttcgggtgctgtcagccaccaataaagacctcaaaaaggaggtt
gaagagggaaattttcgtgaagatctgttttatcggctgaacgtcgttcagctcgacact
ccccccctgagagagcggcttgaagatgttccatttttggtcaaccattttctggaggta
ttcaaaaaagaaaccggtctgttgaatctgaccgtctcccaagacgccatggataaaatg
acccattacgaatggcccggaaatattcgggaactgcgcaatgccattgaacgggcggtg
gttatgggcgacggcaaaaccattctgcccgaagatctgcccatttcggcatccctgccc
aagtttgccggtttgcgggtgggactcaccctcgatgaagccctcaatgaatttaaaaaa
gagttcatcctgctcaatctgcagcataccggcggaaacagaagtaaagccgcaaaaatt
atggatattcaacgaacctatctgtcacggctgattacccgctacggtatgcgggatttg
gcctga
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