Desulfosarcina ovata subsp. sediminis: DSCO28_14490
Help
Entry
DSCO28_14490 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_14490
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_14490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
PAS_9
PAS
AAA_2
Mg_chelatase
PAS_8
AAA
AAA_16
DUF2096_N
IstB_IS21
AAA_7
Nitr_red_assoc
PAS_7
Motif
Other DBs
NCBI-ProteinID:
BBO80883
UniProt:
A0A5K7ZR99
LinkDB
All DBs
Position
complement(1562510..1563988)
Genome browser
AA seq
492 aa
AA seq
DB search
MDKAFLEIFNSILDSIREPLVVLDSDLKVVNANQSFYHTFNVKPEQTEDVLIYDLGNRQW
DIPKLRELLEKILPQNTIFNNFEVDHHFDTIGRKIMHLNARRIYNEANQAQLILLAIEDV
TEREYYKRHLEEMVQKRTAELSVAREEAEKSRHLAEIALDESKKLKDQLEAERAYLQEEI
KLEFNHENIIGRSNEIKYVFYKVEQIAATDTNVLVLGETGTGKELVARAIHGLGSRKDRA
LVKMNCAALPSNLIESELFGHEKGAFTNAHSRRLGRFEIANGTTLFLDEIGELPLDLQPK
LLQVIETGEFERLGSSNTIKVDVRIIAATNRNLEAEVRKGAFREDLWYRLNIFPITMPPL
RERREDIPLLVNYFIYKISKRMGKIIGMVPVNVMDALRNYHWPGNIRELENVLERAVINS
SGSKLRLVDNLKPKQNLANANRTLAAIEREYIFRVLEQTHWKVSGSNSAAEILGLDRSTL
RARMRKLDIHKP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggataaagcctttctggaaatttttaacagcatcctggactcgattcgagagccgttg
gtggtgcttgattccgatctgaaagtcgtaaacgccaaccaatctttctaccacacgttc
aacgtgaagcctgaacaaacagaagacgttttgatttatgatctcggcaaccgccaatgg
gatatccccaagctgagagaattacttgaaaagatccttcctcagaataccatattcaat
aattttgaggtggatcaccatttcgatacgatcggccgaaaaatcatgcatctgaatgcc
cggcggatatacaatgaagcaaaccaggctcagctgattctattggccatcgaggatgtg
acggagcgtgaatattataaaagacatcttgaggaaatggttcaaaagcgaaccgctgaa
ctcagcgtggccagggaggaggcggaaaagagcaggcatctggccgaaattgcccttgat
gaaagtaaaaaactgaaagaccagctcgaagccgagagggcctatcttcaggaagagatc
aaactggaattcaaccatgagaacattattggaagaagcaacgaaatcaaatatgtgttt
tacaaggtcgagcaaatcgctgccacggataccaatgttttggttctcggggaaaccgga
accggcaaagaattggtggcgcgagcgattcatggcttgggctcacgtaaggatcgggcc
ttggtgaaaatgaattgtgccgcgttgccttcaaacctaattgaaagcgaacttttcggc
catgagaaaggcgcctttaccaatgcgcattccagacggttgggccgattcgagatcgcc
aatggcacgaccctgtttctggatgaaataggcgaactgcccctggatttgcagcccaag
ctgctccaggtgatcgagaccggcgagttcgagcgcttaggcagctcaaatacaataaaa
gtcgatgtgcgcatcattgccgctaccaatcgtaatctggaagcggaggtccgcaagggg
gcgttccgggaggatctgtggtaccgactgaatatttttccgatcaccatgccgccgctc
agggaacgcagggaagacattcctttgctggtcaattactttatctataaaatctcaaag
cgaatgggaaaaattatcggcatggttccggtgaatgtaatggacgcgttgcggaactat
cattggcccggcaatatccgtgagcttgaaaatgtcctcgaacgggcggtgatcaactcg
tcaggctccaaattacgtctggttgacaatcttaagccaaaacaaaatctggcaaatgcc
aatcggacccttgccgccattgaacgggagtatatttttcgggtacttgaacagacccac
tggaaagtcagcggcagcaacagtgcggctgaaattcttggcctggaccgcagcaccttg
cgcgcccgcatgcgcaagcttgatatccacaaaccataa
DBGET
integrated database retrieval system
