Desulfosarcina ovata subsp. sediminis: DSCO28_16550
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Entry
DSCO28_16550 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dov03016
]
DSCO28_16550
Enzymes [BR:
dov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
DSCO28_16550
Transfer RNA biogenesis [BR:
dov03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
DSCO28_16550
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
DUF2332
Motif
Other DBs
NCBI-ProteinID:
BBO81089
UniProt:
A0A5K7ZN99
LinkDB
All DBs
Position
complement(1801753..1802871)
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AA seq
372 aa
AA seq
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MQNGHEVIGEPDGADYIVISTCGFDQDREQRSYGIVSDYIRQYAAVAKVIVCGCLASINP
ELFDSSKVTIIGPRELDKFNRIFQPRINIERISGGMVNERFINKGYGFLNAYYLQICQGC
INHCSYCAIKKAKGDVKSKAPEQLIIELENAIEEGYRCVMLLGDDCGSYGADLGTNLADL
LNTIKDYDIGININYIHPRQFQSLYPLLHPRTLERIEFMNVPIQSTSRRILDLMNRPYDA
NDIFKIIHEIKSKYQHIFFETHIIYGFPSETREEFEDAFRAADFFDSVIFFYYTDRKNVS
ASRLKGKIPTAEIMQRTETILNHPRFRIKHGNDHPPVVLLGYELNTTDDIFRSIANSLPH
SDFTSFNQRSSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatggccatgaggtgatcggcgaaccggatggtgccgactacattgtgatcagc
acgtgcggttttgatcaagatcgagagcaacgctcatatggtattgtgtccgattacatt
agacaatatgcggccgttgccaaagtaatcgtatgtggctgcctggcgagtatcaacccg
gaattgtttgattcatcaaaggtcacgatcatcggtccccgggagcttgataagttcaac
cgtatttttcaaccgaggataaatatcgaacgcatatccggggggatggtcaatgagcgg
tttatcaataaagggtatggttttctgaatgcttattatttacagatctgccaaggctgc
atcaatcactgcagttactgcgccatcaaaaaagccaagggtgatgtgaaaagcaaggca
cctgaacaactgatcatcgaattggaaaacgcgatagaggagggttatcggtgcgtgatg
ctgctcggtgacgattgtggcagttatggggcagatctggggacgaatctggccgacctt
ctgaataccatcaaggattatgacatcgggattaatatcaattatattcatccccgccaa
ttccagtcgctttacccattgctgcaccctcgtacgcttgaacggattgaatttatgaac
gtgccgattcagtcgacttcacgccggatacttgatctcatgaatcggccttacgatgcg
aacgacatctttaaaataattcacgaaataaaatcaaaataccagcacatttttttcgaa
acccatatcatctatggctttcccagtgaaacaagggaagagtttgaagacgcatttcgc
gccgccgacttcttcgatagtgtcatctttttttactacaccgaccgaaaaaatgtcagc
gcttcacgtctgaaggggaaaatccccaccgccgagattatgcagcggacggaaacgatt
ctaaatcatccccgatttcgcattaagcacggaaacgatcatccgccggtcgttcttctc
ggatatgagttaaacaccaccgatgacattttcaggtccattgcaaacagtctaccgcac
tcagattttacttctttcaatcagcgatcctcatcatga
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