Desulfosarcina ovata subsp. sediminis: DSCO28_17820
Help
Entry
DSCO28_17820 CDS
T06286
Name
(GenBank) C4-dicarboxylate ABC transporter
Organism
dov
Desulfosarcina ovata subsp. sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DUF3394
Motif
Other DBs
NCBI-ProteinID:
BBO81216
UniProt:
A0A5K7ZJN3
LinkDB
All DBs
Position
complement(1930963..1932942)
Genome browser
AA seq
659 aa
AA seq
DB search
MNTDKKTSKALDLKAVMALQEKRVFPRFANGTDYAVVIAVSLLLAAFQIWTAGFGVLFAL
KQRIIHISLLGALTFFLRPVSSRFDTDGEGRRKVFLWDRTFAALMLTSMVYLLWNYEAIQ
SRAGFPEAWDIGFGLVMIVLLLEMTRRVVGLALPIIACCFLLYAFLGPYMPSMIGHRGYD
LERIVAQMYLTTEGIFGVPAGVSATFIYMFILYGAFLEKSGGGIFFIKLAYALTGRMLGG
PAKASVFASGLMGSISGSAVANTVTTGAFTIPLMKSVGFRPSFAAAVEASASSGGQLMPP
IMGAAAFIMAVFTNIPYKFIMVSAAVPAALYYFAIFISIHFRAKRMGLKPGNAEDLPNAR
ELLKKDWQHIFSLVVLVTLLLMDITPLRAAFWGTLTIIVSCGMRKSTRMSLKSVYEALLL
ASRNTATVGAACACAGIVVGVVTLTGIGLKFATLIEVLAHGNIIIALLMTMVASLILGMG
LPTSACYIVLAVLAAPVLTNLGFPVLASHLFIFYFGIISAITPPVALAAYAGSGISGSNP
FKTAVTALSLDLSAFFIPYWFIFNPELLLGKGVLANIAVIFISAVGVVALSAMTQGYLVR
KLNAAERTIAMLVTFSLLMVDLRWRLLGLGVFGALLVYLKFSAARSREEASGRFVSVEE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggacaagaagacatccaaggccctggatttaaaagcggttatggcgttgcag
gaaaaacgggtgtttccccgttttgccaatgggaccgattatgcagtggtcattgccgtt
tccctgctgctggcggcatttcagatctggacagccggtttcggggtgctttttgcactc
aagcagcgcatcattcacatatcccttttgggcgcgctgaccttcttcctgcgcccggtc
agcagccggttcgatacggatggggaaggccgccggaaagtcttcctttgggaccggact
tttgccgcgctgatgctgacgtccatggtgtatctgttgtggaattacgaggccatccag
agccgcgcgggctttcccgaagcctgggatatcggtttcgggctggtcatgatcgtcttg
cttctggagatgacccggcgggtggtcggcctggccttgccgatcatcgcctgctgcttt
ctgctctacgcgttcctggggccttatatgcccagcatgatcggccaccggggatatgac
ctggagagaatcgttgctcagatgtacctgaccaccgagggtatcttcggtgtaccggca
ggggtgtcggcgaccttcatatacatgttcatcctttacggcgcgtttctggaaaagagc
ggtggcggcatcttctttatcaagctggcctatgccctgaccggtcgcatgctgggcgga
ccggcaaaggcgtcggtgtttgccagcggcctcatgggctccatttccggcagcgccgtt
gccaataccgtgaccaccggcgcgtttaccatcccattgatgaaaagcgtcggtttccgg
ccgagctttgccgcggccgtcgaagcctcggcctcgtcaggcggtcagctcatgccgccg
atcatgggggcggcggcctttatcatggccgtgttcaccaatattccctacaagtttatc
atggtgtcggcggcggtgccggccgcactttactatttcgccattttcatttcgatccat
ttccgggccaaacgcatgggcctgaaacccggcaatgccgaggatctgcccaatgccagg
gaattgctgaagaaagactggcagcacatcttttcactggtggtgctggtcaccctgctg
ctcatggacatcacgccgctcagggcggcattttggggaaccttgaccattatcgtttcc
tgcggaatgcgcaaatcgacccgcatgagcctgaagtccgtttacgaggcgctgctactc
gccagccgcaacacggccaccgtcggtgcggcgtgtgcttgtgcaggaattgttgtgggg
gtggtcaccctgaccggcatcggtctcaagttcgccaccctgatcgaggtgctggcccat
ggcaacatcatcatcgccctgttgatgaccatggtggcatcgctgatcctggggatgggg
ctgcccacatcggcctgttacatcgtactggccgtactggccgcaccggtattgaccaac
ctgggtttcccggttttggcttcgcatctgttcatcttctatttcggcataatttccgcc
atcacgccgcccgtggccctggcggcctatgccggttccggaatatccggatccaatccg
ttcaagaccgcggtgacggcgctctccttggatctttccgcctttttcattccctactgg
ttcatcttcaatccggaacttctgttgggcaagggagtgcttgccaacatcgccgtgatt
ttcatatccgccgtgggggtcgttgccctgtcggccatgacccaggggtatctggtcaga
aagttgaatgccgctgagcgaaccatcgccatgctggtgaccttttcgctcctcatggtc
gatctgaggtggcgtcttctggggctgggtgtgttcggtgcactgcttgtctatctgaaa
ttctcggctgccagatccagagaagaggcatcgggacgtttcgtatctgtcgaagagtga
DBGET
integrated database retrieval system
