Desulfosarcina ovata subsp. sediminis: DSCO28_17860
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Entry
DSCO28_17860 CDS
T06286
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00250
Alanine, aspartate and glutamate metabolism
dov00410
beta-Alanine metabolism
dov00430
Taurine and hypotaurine metabolism
dov00650
Butanoate metabolism
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01120
Microbial metabolism in diverse environments
dov02024
Quorum sensing
Module
dov_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DSCO28_17860
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSCO28_17860
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DSCO28_17860
00430 Taurine and hypotaurine metabolism
DSCO28_17860
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCO28_17860
Enzymes [BR:
dov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
DSCO28_17860
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
BBO81220
UniProt:
A0A5K7ZPX2
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Position
complement(1936074..1937720)
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AA seq
548 aa
AA seq
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MTEQKRRPQLVADHEALARTFHQPENEQSRNVLTKYMEQILFGLHDFLREHVGITEEIPL
KELAAQFSSSTIARTPVKRLADVIAKIIEELAPQAVNVSSPYFIGHMTSAIPFFMVHLST
IVAALNQNPVKLETSKVVSVYERQVLAKVHRLLFNLDETFYETHIQRPESTLGSFVEDGT
LANLSALWVARNRLLPATSGSVGAERDGMANALHDRGLRRVTILVSQLGHYSIRKSAGVL
GLGYDAVTVIPVDRANRMDLNVLQRTLEEHCRDPETAVMAVIGIAGTTETGAVDPLPAIA
RICREFGVHFHVDAAWGGPVLLSERYGHLLKGIELADSVTIDGHKQFYLPMSNGMVFFKD
PQAMDAVAYHAAYINRPGSVDLGIRSLVGSRAATSLVLGSALDIMGADGYALLIDHGIET
ARAFAEEINRRSMFELITAPELNILTYRLVPDGLRESKESNETISGESRLRMLNHVNIQI
QRLQREAGNSFVSRTTLRRSGQPDTVVLRVVLMNPRTTPKILNAILDEQESIYLDSIAPS
LRLKSLTP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcaaaaacgtcgcccccaactggtagctgatcacgaggcactggcgcgcacc
ttccaccagccggaaaatgagcagtcgcgaaatgtgcttaccaaatacatggagcagatc
ctgttcgggctccacgattttttgcgggaacacgtggggattaccgaagagatccccttg
aaagagcttgccgcacagttcagctcctcgacaatcgcgcgtacgccggtgaaaagactg
gccgacgtgatcgccaaaatcatcgaggagcttgctcctcaggcggtcaatgtttcatcc
ccctatttcattggccacatgacatcggccattccatttttcatggtgcacctgagcacc
atcgtcgctgccctgaatcaaaatccggtaaagctggaaacctctaaagtggtgagcgtt
tacgaacgccaggtcctggccaaggtgcaccggttgctgttcaatctggacgagaccttt
tacgaaacacacatccaaaggcccgaaagcaccctgggctctttcgtagaagatggtacg
ctggccaatctttccgccctctgggtcgcccgaaaccgcctgttgccggccacatcgggt
agcgtcggtgccgaacgcgacgggatggcaaatgccctgcacgaccgtggcctccgcagg
gtgacgatactggtatctcaattggggcactactcgatccgtaaatccgccggtgtgttg
ggtctgggctacgacgccgtgacggtgattcccgtggaccgtgccaaccgcatggatctg
aacgtgctccaacgcaccctcgaggagcactgccgggaccctgaaaccgcagtcatggcc
gttatcggtattgccggcacaacggaaaccggcgctgtggatccgttgcccgccatcgcc
cggatctgccgcgagttcggcgttcactttcatgtggatgcggcctggggcgggcccgtg
ctgctgtcagaacgctatggtcacttgctcaagggtatcgagctggcggattcggtcacc
attgacgggcacaaacagttctacctgcccatgagcaacggcatggtgttctttaaggac
ccccaggccatggatgccgtggcctaccatgccgcctacatcaaccggccgggctctgtc
gatctgggcatccgctccttggtgggctcgcgtgccgcgacgtcactggtcctgggaagc
gctctggacatcatgggggccgatggatacgcgctgctcatcgaccacggaatcgaaacc
gcccgcgcctttgccgaagagatcaaccgccgttccatgttcgagttgatcaccgcgccg
gaactcaacattctgacctaccgcttggtacccgacgggctgcgtgaatccaaagaatca
aatgaaacaatcagcggagagagccgcttgcgcatgttgaaccacgttaacatccaaatt
cagcgattgcagcgggaggccggcaacagtttcgtttcccgaactactttgcggcggtcc
ggccaacccgacaccgtggttctgcgcgtggtgctcatgaacccccgcacgaccccgaaa
attctcaacgcgatcctggacgaacaggaatccatttacctggacagcattgcgccatca
ctacgattgaaatctcttaccccatga
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