Desulfosarcina ovata subsp. sediminis: DSCO28_20020
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Entry
DSCO28_20020 CDS
T06286
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02020
Two-component system
dov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSCO28_20020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCO28_20020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_20020
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
DSCO28_20020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
Sigma70_r4
MarR_2
HTH_24
TrmB
HTH_IclR
HTH_3
MarR
DUF1670
GntR
Ead_Ea22
HTH_23
Phage_rep_O
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
BBO81436
UniProt:
A0A5K7ZK76
LinkDB
All DBs
Position
complement(2161296..2161931)
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AA seq
211 aa
AA seq
DB search
MLERVALFSNLEPQQIARLESICLERTVPKNTLVINEGDETDCLYVLLAGKAQALRSDDS
GRQFVVNRFAPDDYFGEMSLLDRRTRCATVITKTQCTLLILPRKAFFDFADAHPELYRNV
IGTLLDKLRKATQQIEELAFLDVYGRLARLLTESQNADGIIEEKLTQQDLADMVGSSRET
VCRIYNELVDGGFVVKDKGRMRIKKKLPFNF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacgggtcgccctcttttcgaatctcgaaccgcagcagattgcccggctggag
tccatctgcctggagcggacggttccgaaaaacacgctggtgatcaacgagggcgatgag
accgattgcctctatgtgctgctggcgggcaaggcccaggccttgcgcagtgatgattcg
ggccgccagtttgtcgtcaatcgtttcgcgcctgacgactatttcggcgaaatgagtctt
cttgaccgtcgtacccgttgtgccactgtcatcaccaaaacacagtgcaccctgctgatc
ctgccccgcaaagcgtttttcgattttgccgatgcgcatcccgaactctaccgcaatgtg
atcggtaccctcctggacaaactcagaaaggccacccagcaaatcgaggaactggccttt
ctggacgtctacggtcgcctggcccgtttgctcactgaaagccagaatgccgacggaatt
attgaagagaaactgacccagcaagatcttgccgatatggtcggctcatcccgggaaacc
gtctgccgcatttacaacgaactggtcgacggtggctttgttgtcaaggataaaggccgc
atgagaataaagaaaaaactgcctttcaacttttaa
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